Bidens hawaiensis: 143559556
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Entry
143559556 CDS
T11418
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143559556
03036 Chromosome and associated proteins [BR:
bhw03036
]
143559556
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
143559556
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
143559556
SLIK complex
143559556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
CHDCT2
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
143559556
NCBI-ProteinID:
XP_076904206
LinkDB
All DBs
Position
Unknown
AA seq
1659 aa
AA seq
DB search
MAFFRNYTNAAVSDIDLNDKRPGGNDDLETTSTMDKEFTTKTLNESDDNLLNLGDTNTNA
TRKPSGKWGSTFWKDCQPMNHRQGSDSGHESKSSSGYNIEDGSGNDLSEVNKGQNIDEML
SDDYYELDGDDQNDSLHHKFVNNAAGYSSIPQPRVAASNFLSRNKSKSSFRDDYVEDAEF
EDDDEEEEDEDDPADADFDPDLITTSDGRGKKVHDEDWDGEDLDEDDNFEDDELDISDDN
IYKKSSGIQRQKRGSKPSRESKPSISLSRRKRGRSRTSFDDEEDPNDSDDYFEDDFKSTR
SSHPRKDTTKASGRFNEVRTSTRSVRKVSYVESDESEEHDEDAKKKTHKDEMEEEDGDSI
EKVLWHQPKGMAEEAMQNNKSTEPVLLSHLFDSEPDWYDTEFFIKWKGQSHLHCQWKSFS
QLQNLSGFKKVINYTKKVVEEIKHRRAVSREEIEVIDVSKEMDLDLIKQNCQVERIIADR
LSKGLEVPEYLVKWQGLSYAEATWEKFDDIAFAQAAIDEYKAREAALAAAQGKMVDFQRR
KSKASLRKLDEQPDWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSML
GFLQNSQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNMIVYVGTRASREVCQQYEFFSDK
NAGGTTKFDALLTTYEVLLKDKMVLSTIKWNYLMVDEAHRLKNSEASLYTTLKEFRTKNK
LLITGTPLQNSVEELWALLHFLDSDKFHSKDEFVQNYKNLSSFNENELANLHMELRPHIL
RRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVEL
KKCCNHPFLFESADHGYGGDSGITGSSKLERVILSSGKLVILDKLLDRLHETNHRVLIFS
QMVKMLDILAEYLSIKGFKYQRLDGSTKSEVRHQAMEHFNAPGSDDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV
LDHLVIQKLNAEGRLEKKEAKKGSGFDKNELSAILRFGAEELFKEDRNDEENKKRLLSMD
IDEILERAEKVEQKGAEGEPGNELLSAFKVANFCSAEDDGTFWSRWIKPEAIAQADEALA
PRAARNNSKSYAEEFPPERNNKRKKKNVEIQDKNIKHRKADLTSYQTPAMEGASAQTRGW
SYGTLPKRDATRFFRAVKKFGNDSQIDLIAAEVGGCVEAAPVEAQVELFDALLDGCREAV
SGGSLDAKGPLLDFFGVPVKADDLLNRVEELQLLGKRINRYKDPISQFQALMYLKPATWS
KGCGWNQKDDARLLLGIHYHGFGNWEKIRLDEKLGLMKKIAPVELQHHETFLPRAPQLKE
RASQLLEMELVAVGGKSLGPKTGRKGSKKQQKDHPPNIPTLRAKGKQLKPSPVTNEKLKM
TRGKKNEALVKEEGEMSDTEEVYEQFKEVKWMEWCEDVLTQEKKTLERLHRLQTTSADLP
KEKVLSRIRNYLQILGQKVDQIVIDHEEDPYKQDRMTTRLWNYVSNFSNLSGGKLQQIYS
KLKQENEVASGVGTSQINPRGFRNQSSSGSLNKGVLDTAKFEAWKRRRRAESDPNTTVHL
LPRPSFTSPDPSLGILGPAPTHNTRPTRQSAFGPKQGFT
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggcattttttagaaactataccaatgctgcagtttcagatattgatttgaatgacaag
aggccaggtggaaatgatgatttggaaacaacttctactatggataaagagtttacaaca
aagacactaaatgagtcagatgataacttattgaatttaggggatactaatactaatgct
acaaggaaaccatcggggaaatggggttcaacgttttggaaggactgccaaccgatgaat
catagacaggggtcggactcagggcatgaatcgaaaagcagttctggttataacattgaa
gatggatcagggaatgatttgtcagaagtaaataaaggtcagaacattgatgagatgttg
tctgatgattattatgagttggatggagatgaccaaaatgattcactgcaccacaagttt
gtaaacaatgcagctggttatagttcaataccacagccgcgtgttgctgccagtaacttt
ttgtctagaaacaagtctaaatcttcttttcgggatgattatgttgaagatgctgaattt
gaagatgatgatgaggaagaagaagatgaagatgaccctgcagatgcagattttgatcct
gatttaatcacaacaagtgatggaagagggaagaaggtacatgatgaagactgggacggt
gaggatttagatgaagacgataactttgaggatgatgaattagacatctcagatgacaat
atttataaaaaatcaagtggcatacaaaggcagaagcgtggttcaaagccaagtagagaa
tctaaaccatcaatctctttgagtcggaggaaaagaggtagaagtagaacatcatttgat
gatgaagaagatccaaatgattcagatgattattttgaagatgactttaaaagtacaaga
agtagtcatcctcgcaaagacactacaaaagcttctggaagattcaatgaagttagaact
tcaaccagatccgtgcgcaaagtatcatatgttgaaagtgacgaaagcgaagagcatgat
gaagatgccaagaaaaagacccacaaggatgagatggaagaggaagatggtgactctatt
gagaaggtgctgtggcatcagccaaagggcatggcagaagaagctatgcagaacaacaaa
tctactgagcctgtattgttgagccatttatttgactcagagccagattggtatgatact
gaattctttatcaaatggaaaggccaatcacatttgcattgtcaatggaaatcattttct
caactacaaaatttgagtgggtttaagaaggttataaactacactaaaaaagttgtggaa
gaaataaagcacaggagagcagtatctcgtgaggagattgaggttattgacgtgagcaag
gagatggatttagatcttatcaagcagaattgtcaggttgagaggataattgctgataga
ctcagcaaaggcttggaagttccagagtatttggttaagtggcaaggactctcatatgct
gaagcaacatgggagaagtttgatgatattgcgtttgcacaagcagcaattgatgaatat
aaggctcgagaagctgctcttgcagctgcacaaggaaaaatggtagattttcagcgaaga
aagagtaaagcaagtttgagaaagcttgatgaacaacctgattggttaaaaggcggaaaa
ctgagagactatcaacttgagggcttgaattttcttgttaatagctggagaaatgataca
aatgtgatattagctgatgaaatgggtcttggaaaaactgttcagtcggtttctatgctt
ggttttcttcagaactcacaacaaattcatgggccttttcttgttgttgttcctttatca
actctgtcaaattgggctaaagagttcagaaagtggcttcctgatatgaacatgatcgta
tatgttgggactcgtgcaagtcgagaggtttgccagcaatatgaatttttctctgataag
aacgctggtggcactacaaagtttgatgcactattaacaacctatgaagttttactaaag
gataagatggtgctatcaacaattaagtggaactaccttatggttgatgaagcacatagg
ttaaaaaacagtgaagcgtcattatatacaacactcaaggaattcagaacgaaaaacaag
cttcttattactggcactcctctgcaaaacagtgtggaagaattatgggcgttgcttcac
tttcttgactcggataaattccatagcaaggatgagtttgttcagaattacaagaatctt
agttcatttaatgaaaatgagcttgctaatcttcatatggagttacggccccacattctg
cggagagttataaaggatgtggagaagtcattgccaccaaagattgagcggattcttcgg
gttgagatgtcccctctacagaagcagtattacaagtggattctggaacgcaattttcat
gacttgaacaaaggtgtacgaggaaatcaggtttctcttttaaacattgtggttgagttg
aagaaatgctgtaatcatccattcctatttgagagtgctgaccatggttatggtggcgac
tctggaattactggtagcagtaaactggagcgagtaattcttagcagtggaaaactagtt
atcctggataaacttcttgacagattgcatgaaacaaatcaccgtgttttaatattttca
cagatggttaagatgttggatattttagcagaatacttgtcaattaagggattcaagtat
caaagacttgatggaagtacaaaatctgaggtacgccaccaagctatggagcattttaat
gcaccgggaagtgatgatttctgcttccttctttccactcgtgctggtggtttaggtatc
aaccttgcaaccgcagatacagtcatcatatttgactctgactggaatcctcaaaacgat
ctgcaggcaatgagtagagctcatagaattggacagcaggaggttgttaatatctatagg
tttgtgacaagcaagagtgttgaggaagacatcttggaacgcgcaaaaaagaaaatggta
cttgatcatttagttattcagaagctaaatgctgagggaagattggagaagaaagaagct
aaaaaaggaagtggatttgacaagaacgagttatctgctattttgagatttggggcggag
gaattgttcaaagaagatagaaatgacgaagaaaacaaaaaacgtcttctaagcatggat
attgatgaaattcttgaaagagcagagaaagttgaacagaaaggagctgaaggagaacca
ggaaatgaattgctaagtgcatttaaggttgcaaatttctgctctgctgaagatgatgga
actttctggagtcgatggattaaacctgaagccattgcacaggctgatgaagctttagct
ccacgagctgcaaggaacaacagcaagagttatgctgaggaatttccacctgaaagaaat
aataaaaggaaaaagaaaaatgttgaaattcaagacaaaaatataaagcatcgaaaggct
gatttgacaagttaccaaactccagcaatggagggagcttctgcacaaacaagaggttgg
tcatatggcaccttgcctaagagagatgctacacgttttttccgtgcggtaaagaagttt
gggaacgacagccaaattgacttaatagcagccgaggttggtggctgtgttgaagctgct
ccagtggaggcacaggttgagctttttgatgcattattagatggttgcagagaagctgtt
agtggaggaagtctggatgcaaagggcccattgttggatttttttggtgttcctgtaaag
gctgatgatctactaaaccgtgttgaagaacttcaacttcttggaaagcgcattaaccgc
tacaaagatccaatctcacagtttcaggctttgatgtatctcaaacctgcaacttggtct
aaaggttgtgggtggaaccagaaggatgacgcgcgattgctactagggatccattatcat
ggatttggaaactgggaaaagataagactagatgaaaagctcggtcttatgaaaaagatc
gcccctgtggaacttcaacatcatgaaacattcttaccgcgggcccctcagttaaaagaa
cgagcttctcaacttcttgaaatggaacttgtggctgttggtggcaagagtttagggccc
aaaactggcagaaagggttctaaaaagcagcaaaaggatcatccacccaacattccaact
ttgcgtgctaaaggaaaacagttgaaaccatcacccgtcacaaacgagaaactgaaaatg
acacgtggcaaaaagaacgaggcgttagttaaagaagaaggtgagatgtcagacactgaa
gaggtttatgaacagttcaaggaagttaaatggatggaatggtgtgaagatgtgttgact
caagagaaaaagacactcgaacgccttcataggttgcaaactaccagtgccgatcttcct
aaagaaaaagtcctttctagaattagaaattatctacagattcttgggcaaaaggttgac
cagattgttattgaccatgaggaggatccatacaagcaagacaggatgacaacacgactc
tggaactacgtctcaaacttttcaaacttatctggcggtaaacttcaacaaatctattcc
aaactcaaacaagaaaacgaggttgcatcaggagttggtacatctcaaatcaacccaaga
ggctttagaaaccaatcatcatctgggtcacttaacaaaggcgtgctcgatacagcaaag
tttgaagcatggaaaagaagacgacgagcagaatctgacccaaacacaaccgtccattta
ctaccaagaccatctttcacctcacccgacccaagtttgggaattctgggacccgcaccg
actcataataccagacccacccgccagtctgcttttggtccaaaacaaggttttacataa
DBGET
integrated database retrieval system
