Bidens hawaiensis: 143560441
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Entry
143560441 CDS
T11418
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143560441
03036 Chromosome and associated proteins [BR:
bhw03036
]
143560441
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
143560441
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
143560441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143560441
NCBI-ProteinID:
XP_076904858
LinkDB
All DBs
Position
Unknown
AA seq
1962 aa
AA seq
DB search
MARKKRMSKREAEVDETIELDDNEDEDLDEFEVDGFIVDDDEDEDDLKIVSSGSQRKKKK
RSQKNFFVDDEDYELIEENTGIRRSKHESKFNRLKKARTNAGEGSSGYLDDLFGADDDSI
LDGSDEDDMTDFIVEDDVADEHGGSSRKKKSTQSPGASSNDIFGDLDEFSKVNKYDETSE
LKEAKVEDEFEPIINSEKYMTKKDDQIKKTDIPERMQISEEVTGSHSAFAMTIDRESNWI
INQLKLAKGGSNTTEEGNENELSTLKEDIKRFLKLVHVDNFDVPFIAMYRKEECQSLFKD
QEADLENQYSSDEKPTLRWHKALWNILDLDRKWLLFQKRKSALQLYYNKRFDEDRDIYDE
TRLHLDQKFFESIIKFLNMAETEWEIDDVDAKFNLHFPPGEVVVNEGEFKRPKRRSQYNI
CTEAGLREVAIKFGYSPEEFGLLISLEQMRDEPQNAVETPEDVASRFTCPTFDNPQAVLA
GARHMAALEISNEPLVKKHVRDFFMENATVSTSPTAEGKLVIDTYHQFAGIKWLKDKPLT
KFDDAQWLLIQKAELDNLIQVSLKLSTTSHDKLISDANDYYLSTGTSESVVLWNEQRKQI
IKDAFDGFLLPSMEKEARSLLTSRAKSWLQMEYGRLLRDKVSVAPYQKKGFDSPRVMACC
WGPGRPATTFVMLDAFGEVVDVLTAGSLSIRGQSVNDQQRKKNDQLRILKFMTDHKPNVV
ILGAVSVPCSRLKEDIYEIVCKMDDVDGLSVVYGDESLPRLYENLEISSVQLHSRTGIVK
RAVALGRYLQNPLAMAATLCGPGKEILSWKLSPLQSFLTSNEKYDVVEQVMIDVTNQVGL
DVNLAISHEWLFAPLQFISGLGPTKAASLQRSLVRSGSIYSRKDLLNHNLGRIVFINVVG
FLRVQRSGNAVSSSQLIDLLDDTRIHPESYCIAQELAKDIYRAEINDDAIIDDDDDIIDI
AVLHLRENPSLLKSLEVDTYASSKKLENKKDTIALIKMELLHGFQDCRREYVEPSQEEEF
CMISGETNNSLSEGRIVQVTVRRVLPQRAVCSLASGLSGMLYKEDFSDDCNDDDDLTDKL
KEGQTLTCKIKSVVKDRYQVSLSCKESHMKSNWSSEIDKPVDPYYKEVRETLGSGNDKPN
KVKEIAKKLFKPRMIVHPHFKNVTIDDAIYLLSGKESGASILRPSSRGPSYLTLTLKVYN
GVYAHKDILEGEKDQKDISSLLRLGKTLKIGDDVFADLDAVITGYVDPLVANLKKMLDYR
MFKHGTKAEVDESLRKEKTEHPMRIVYSFGVSHEHPGAFILTYIRTSNAHHEYIGLYPKG
FRFRKQMFQEIDRLVAYFQKHIDDPREPVRPVSTGGWGGSDDQDGGGRGRGRGRGRGRGR
GRGRRRGDDSGNDNQDSGYGGGGSSWGGGASGGDSGGGGGGWSGGGGGGGASGGDDGGGG
GGWSAGASGGGGGGWGKKSNDDASGSGETKMDADSGGWGAKKSTEAGGSGGWSGGGGGGS
WGHKSIGDTKGDTDGGGWDTKSTEAGGGGSSWGKKSNDDASGSGETKMDADSGGWGAKKS
TEAGGSGGWSGGGGGGSWGQKSTGDTKGDTDGGGWGTKSTEAGGGGGGGDWGKKSNDNDS
GSGDGGGGWGKKGNDNDSGDGGGWGAKKSTEASGGGGWSGGGGGGWGKKNDSGSGDTKGD
ADGGGWGAKKSTEAGGSGGWSGGGGGSCGKSSGGFGSGDANMDADNGGWGGKKSTEAGGS
GGWGGSDNQDGGRGRGRGRGRGRGRGRGGDSDNDNQGLGYGGGGSWDGGGGSGGDGGGGW
SSGGGGRGGRGGRGGRGDSDNNNQGSGYGGGGGWSSGGGGRGGRGGRGGRGDSDNDNQGS
GYGGGGGWSSGGGGRGGRGGRGGRGDSDNDNQGSGYGGGGSWGGGGGSDGGGGWSSGGGG
RGGRGGRGGGGSWSGGGGGRGGGGGSWGGGEGGGGGGWWRWR
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaagaagagaatgtccaaacgagaagctgaagtcgatgagacgatagagctt
gatgataacgaagacgaagatctcgatgagtttgaggttgacggattcatagtggatgat
gatgaagatgaagatgacctgaaaatcgtcagtagtgggagtcaaaggaagaaaaagaag
agatcacagaagaatttttttgttgatgatgaggattacgagcttattgaagaaaacact
ggcattcgtcgctcaaaacatgaaagtaagtttaatcggctgaagaaagcaagaactaat
gctggtgaaggatcgtcagggtatcttgacgatttgtttggagcggatgatgattcaatt
ctagacggaagtgatgaagatgacatgactgactttattgtagaagatgatgtagcagat
gaacatggtggttcatcgaggaagaaaaagtcaacacagtcaccaggagcttcttctaat
gacatttttggtgatcttgatgagttttcaaaagttaacaaatatgatgagaccagtgag
ttaaaggaagcaaaagttgaagatgagtttgaaccaattatcaattcagagaagtacatg
accaagaaagatgatcaaattaagaagacagacattcctgaaagaatgcagatatctgag
gaagtcactggatctcattcggcatttgctatgaccatagacagagagagtaactggatt
attaatcaacttaaattggccaaaggaggtagcaatacaactgaagaaggaaatgaaaat
gagttatccacacttaaggaagatattaaaaggttcttgaagcttgttcacgtggataat
tttgatgtgccatttattgctatgtatagaaaggaggagtgccaaagcttgtttaaggat
caagaagctgatttggagaatcaatattcttctgatgaaaaaccaacactgaggtggcac
aaggcgctttggaatatcttggatttagacagaaagtggttactctttcaaaaaaggaaa
agtgctctacaactgtactacaataagcggtttgatgaagacagagacatatatgatgaa
actcgccttcatttggatcagaaattcttcgagtcaattatcaagttcttaaatatggct
gaaacagaatgggaaatcgatgacgtggacgccaaatttaaccttcattttccacctggt
gaagttgtagtcaatgaaggggaattcaagaggcctaagagaagatcacagtataacatt
tgcactgaagctggccttcgggaagttgctatcaagtttggttatagccctgaggaattt
ggattactgatttctcttgaacaaatgagagatgaaccacagaatgctgttgaaacccct
gaagatgtggcatcaaggtttacatgtccaacgtttgataacccgcaagctgtgcttgca
ggtgctaggcacatggctgcacttgagattagcaatgagccgttggtgaaaaagcatgtt
cgtgacttctttatggaaaatgcgacagtatcaacaagtcccactgctgaagggaagtta
gttatagacacgtatcatcagtttgcaggaatcaaatggttaaaggacaaaccactaaca
aagtttgatgatgcacaatggcttcttattcagaaagccgagcttgataatctcatccaa
gtttctctaaagctttctacaacttcccatgataagttaattagtgatgctaatgactat
tacctcagtactggcactagtgaatctgttgtactatggaatgagcaacgaaagcagatt
ataaaagatgcatttgatggtttccttctaccttctatggagaaagaagcaagatccttg
ttaacaagcagagcaaaaagttggctacaaatggaatatggaagattgctaagggataaa
gtgtcggttgcaccttatcagaagaagggatttgattcacccagggttatggcatgctgt
tggggcccgggtaggcctgcaacaacttttgtgatgctggatgcttttggtgaagttgtt
gatgtgttgactgctggctctttgagtatacgtggtcaaagtgttaacgatcagcaacgc
aagaagaatgatcagttacgaattttgaaattcatgacagatcacaaacccaatgttgtt
attttgggagctgtgagtgtgccttgtagccggctgaaggaagatatttatgagatagtt
tgcaagatggatgacgtggatggtctaagtgttgtatatggggatgagtctcttcctcgc
ttgtatgaaaatttagaaatatcatctgtgcagcttcattctcgaactggcattgttaag
cgtgctgttgcccttggacgttatcttcaaaatccattagcaatggctgcaactctttgt
gggcctgggaaggagatattatcatggaaacttagtcctttacagagctttcttacatct
aatgagaagtatgacgtagttgaacaagtaatgatagatgtcactaaccaagtgggccta
gatgtaaatttggctataagtcatgaatggttatttgcacctctacaattcatttctggg
ctgggacccacaaaagctgcttctttacaacgatcattagtgagatccggttctatatac
tcgagaaaggacttgttgaaccataatcttggtaggatagtgtttataaacgttgtcggt
ttcttacgtgttcaacgaagtggaaatgctgtcagcagtagtcagttgattgatttgtta
gatgatactaggattcacccagaatcatattgtattgcacaagagttagctaaagatata
taccgtgctgaaataaacgatgatgccatcattgatgatgatgatgacataattgatata
gctgtgcttcacttgagagagaatcctagcttgttaaagagtctggaggttgacacgtat
gctagctctaagaaattggagaataaaaaagatacaatagcccttataaagatggaattg
ttgcatggttttcaagattgtcgaagagaatacgtggaaccgagtcaagaagaagagttt
tgcatgatttctggtgagacaaataattcactttcagaagggaggattgtgcaggttacg
gttcgccgggtgctacctcagagggcagtctgtagtcttgcatcagggttgagcgggatg
ctatacaaggaagattttagtgatgattgtaatgatgatgatgatttgaccgataagtta
aaggaaggtcaaactttgacttgtaaaattaagtcagttgtgaaagataggtaccaggtt
tctcttagctgtaaggaaagtcatatgaagagtaattggtcttctgagattgataaaccg
gtggatccttattataaagaagttcgggaaactttagggtctggaaatgacaagcctaat
aaagtgaaggagatagcaaagaaactttttaagccaagaatgattgttcatcctcacttc
aagaatgttacaattgatgatgcaatatatttactttctgggaaagaatctggtgcgagt
attcttcgtcctagttctcgtggaccctcatacttaactttgacactcaaggtttacaat
ggagtatatgctcacaaggacattctagaaggtgaaaaagaccagaaggatatttcaagc
ttgcttcgtctcgggaaaacattaaaaatcggagatgacgtatttgcggatcttgatgcg
gtgattactggatatgtagatccattggtggctaatctgaagaaaatgttggattacaga
atgtttaagcatggaacaaaagctgaagttgatgagagtttaaggaaggaaaaaactgaa
cacccaatgagaattgtgtattcttttggtgtgtctcatgaacatccaggggcgtttatc
ttaacatacataaggacttcaaatgcacatcatgagtatattgggctgtatccgaaaggg
ttcagattcaggaaacagatgtttcaggaaattgatagattagttgcttatttccaaaaa
cacattgatgatccccgtgaaccggtccgtcctgtttcaactggtggctggggtggctct
gacgatcaagatggcggtggccgtggacgggggagaggtcgtgggcggggaagaggaaga
ggtcgtggacggagaagaggagatgactctggaaatgataaccaggattcaggttatgga
ggtggcggtagtagttggggtggcggtgcaagtgggggtgacagtggcggcggtggtggt
ggttggagtgggggaggcggaggcggtggtgcaagtggaggtgatgatggcggtggtggt
ggtggttggagtgcgggtgcaagtggtggtggtggtggtggttggggcaagaaaagcaac
gatgatgcttctggttcaggtgagacaaagatggatgcggatagtggtggatggggtgca
aagaagagtaccgaagcagggggcagtggtggatggtctggtggtggcggtggcggaagt
tggggacataagagtattggtgatacgaagggggatacagatggcggtggttgggacaca
aagagtactgaagcaggtgggggtggtagtagttggggtaagaaaagcaacgacgatgct
tctggttcaggtgagacaaagatggatgcggatagtggtggatggggtgcaaagaagagt
accgaagcagggggcagtggtggatggtctggcggtggcggtggcggaagttggggacag
aagagtactggtgatacgaagggggatacagatggcggtggttggggcacaaagagtact
gaagcaggtgggggtggtggcggaggcgattgggggaaaaagagtaacgataatgattct
ggttctggggatggcggaggcggttggggaaaaaagggtaacgataatgattctggggat
ggcggtggttggggcgcaaagaagagtaccgaagcaagtgggggtggtggatggtctggt
ggtggtggaggcggttggggaaaaaagaatgattctggttcaggtgatactaagggggat
gcagatggcggtgggtggggtgcaaagaagagtactgaagcaggaggaagtggtggatgg
tctggtggtggtggaggtagttgtgggaagagcagtggtggttttggttcaggtgatgcc
aacatggatgcagataatggtgggtggggtggtaagaagagtactgaagcaggtgggagt
ggtggatggggtggttctgataatcaagacggtggtcgtgggcgaggtagaggaaggggt
cgtggaagaggtcgcggacggggaggtgattctgataacgataatcagggtttgggttat
ggaggcggtggcagctgggatggtggtggcggaagtggcggcgacggtggtggtggttgg
agtagtggtgggggtggccgtggtggtaggggtggccgcggtggtaggggtgattctgat
aacaataatcagggttcaggctacggaggtggtggcggttggagcagtggtgggggtggc
cgtggtggtaggggtggccgcggtggtaggggtgattctgataacgataatcagggttca
ggctacggaggtggtggcggttggagcagtggtgggggtggccgtggtggtaggggtggc
cgtggcggtaggggtgattctgataatgataatcagggttcgggctacggaggtggtggc
agctggggtggtggcggcggaagtgacggtggtggcggttggagcagtggtgggggtggc
cgtggtggtaggggtggccgcggcggtggtggtagttggagtggtggtggaggtggccgt
ggaggcggtggaggtagctggggcggtggtgagggtggtggaggtggcggttggtggagg
tggcggtga
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integrated database retrieval system
