Bidens hawaiensis: 143560799
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Entry
143560799 CDS
T11418
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143560799
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
143560799
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
143560799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
T2SSE
DEXQc_Suv3
AAA_19
Motif
Other DBs
NCBI-GeneID:
143560799
NCBI-ProteinID:
XP_076905131
LinkDB
All DBs
Position
Unknown
AA seq
2083 aa
AA seq
DB search
MLLELPRLTNSLREPFDADQAYLNRKSLLQSLYNRRSSAKPVDEFEVARKIVHRWDEASI
EVRQAYRQFVGAVVELIGGVVNNEEFKEAALAVYKLFGAHEEEDNNNSLMFIEKKSELQK
ILGHGVSDAKLQKVVSAVQSLSSLQPDNHESLSLLERQENESDDGQEFGANLVFHQPTRF
LVDASFDDGEIWGERTNVTSTSIHREWNDHSENTNRTYDLEWLRDECNRIVNSSSSQLPQ
DELAMAICRVLESDKAGDEIAGDLLDLVGDGAFQTVQDLLTHRKELVAAIHHGIQNLKSE
KVVSNSQPRMPSYGTQVTVHTESEKQFDKLRRKEEKKNKRGADHGSDSDLSAMSFSSLLH
ASTKKSPFDDLMGLGDGPNILATTALPQGTTRKHHKGYEEVSIPPSQTAPMKPGEKLIEI
KELDEFAQAAFQGYKTLNRIQSRIFQTTYHTNENILVCAPTGAGKTNIAMIAILHEIGQH
FKDGYLHKNEFKIVYVAPMKALAAEVTKAFSHRLAPLNMVVRELTGDMQLSKTELEETQM
IVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQSM
IRIVGLSATLPNYLEVAQFLRVSPDAGLFFFDSSYRPVPLAQQYIGITEPNFQARNELLN
EVCYKKVADSLKQGHQAMVFVHSRKDTGKTADKLIELARKYNELDLFMNEEHPQFHLVKM
EVAKSRNKQLVQLFGSGVGIHHAGMLRADRGLTERLFADGLLKVLVCTATLAWGVNLPAH
TVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLT
SQLPIESQFISSLKDNLNAEVTLGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGWDEVI
ADPSLGLKQRSLVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIHYSSVETYNEM
LRRHMSDSEIIDMVAHSSEFENIVVREEEQNELETLLRTVCPLEVKGGPTNKHGKVSILI
QLYISRGSIDAFSLISDAAYISASLARIMRALFEICLRRGWCEMTSFMLEYCKAVDRQIW
PHQHPLRQFDRDISPEILRKLEEHEIDLDHLQEMKEKEIGAMIRYAPAGRVVKQYLAFFP
SIILSATISPITRTVLKVDLVITPDFVWKDRWHGAAQRWWILVEDSDNDHIYHSELFTLT
KRAAKGDPQKLSFTVPIFEPHPPQYYIRAVSDSWLQAEAFYTISFKNLALPESHTTHTEL
LDLKPLPVTALGNKAYEELYRFSHFNPIQTQAFHVLYHTQNNILLGAPTGSGKTISAELA
MLHLFNSAPDMKVIYIAPLKAIVRERMNDWKNGLVTKLGKKMVEMTGDYTPDMMALMSAD
IIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTER
PVRFVGLSTALANAQNLADWLGVEEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMN
KPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPVQFLAMPEDALQMILSQ
VTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVII
KGTEYYDGKAKRYIDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP
VESSLRDQLHDHINAEIVSGTISHKQDAVHYLTWTYLFRRLMVNPAYYGLEDSDPQSLSS
YLSSLVQDTFEDLEDGGCIKMDEDNVESLMLGSVASQYYLKYMTISMFASNIGPDTSLEV
FLNVLSAASEYDELPVRHNEENYNEALSAKVPLAVDKNRLDDPHVKTNLLFQAHFSQVEL
PISDYYTDLKSVLDQSIRIIQAMIDVCANSGWLSSSVTCMHLLQMVMQGMWFERDSPLWM
LPCMTEDLVTSLQKGGISSIQQLLNLTNTNMQSRFGNIASRLQQDLQHFPRIQVKLKIQG
GDDGNDNVPSLSIRLEKLNRRKTSRAFTPRFPKLKDEAWWLVLGNTATSELHALKRISFT
DRLVTRMKLPSTTTSFQGMKLLLVSDCYLGFDQEYSIEELMES
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgaactgccgcggttaaccaattctctccgggagccattcgacgccgatcaa
gcttatctcaaccgtaaatccctactccaatcgctctataaccgtcgcagctcggcgaaa
ccggttgatgagttcgaagttgctcggaagattgttcatcgatgggatgaagcttctata
gaagtccggcaagcgtacagacagtttgttggggcggtggttgaattgattggtggagtg
gtgaacaatgaggagtttaaagaggcggcgttggcagtatataagctttttggtgctcat
gaagaagaagataataataatagtttgatgttcattgagaagaaatctgaactgcaaaag
atacttggtcatggtgtttcagatgcaaagctacaaaaggttgttagtgctgttcaaagt
ctttccagtttgcagccagacaaccacgagtcactgtctttacttgaaagacaagaaaat
gagagtgatgatggacaagaatttggtgcaaatttggtttttcatcagccaacgcggttc
ttggttgatgcatcttttgatgatggagagatatggggggagcgtacaaatgtaacttca
acctcaattcatcgggagtggaatgatcatagtgagaacacaaatagaacatatgatttg
gaatggttaagagatgaatgcaatagaatagtgaatagtagtagttctcaacttcctcaa
gatgaactagcaatggctatttgccgggtacttgaatcagacaaagctggtgatgagata
gctggtgatttgttggatctagttggtgatggtgcatttcaaacggttcaagatcttctc
acgcataggaaagaacttgttgctgccattcatcatgggattcagaacttaaaatctgaa
aaagtggtttctaactctcaaccacgcatgcctagctatggtactcaggttactgttcac
acagaatcagaaaagcaatttgataaattgagacgcaaagaggagaagaaaaataaacgt
ggagcagatcatgggtctgacagtgacttgtctgctatgagttttagttctttgcttcat
gcaagtacaaagaaaagcccatttgatgatttgatgggacttggtgatgggcccaacata
ttagcaactactgctcttcctcagggaactactaggaagcatcataagggatatgaagaa
gtttccataccaccctcacagactgcacccatgaagcctggagagaagctgatcgaaata
aaggagttggatgaatttgcacaagctgcttttcaaggctacaagacactcaaccgtatt
cagagcagaatattccaaactacttaccatactaatgaaaatattctggtgtgtgctcca
acgggagctggcaaaacaaatatcgctatgattgctattctgcatgagattggacagcac
ttcaaagatggatatttgcataaaaatgagtttaagatagtttatgttgctccaatgaag
gcattagctgctgaagttaccaaggcatttagtcatcgattagctccattgaacatggtt
gtgagagaacttactggtgacatgcagctttctaaaactgaactggaagaaactcagatg
attgtaacaacacctgagaaatgggatgtcatcacccgtaaaagtagtgacatgtcactc
tcgatgctggtaaagcttctaattatcgatgaagtacatctccttaatgatgatagaggg
cctgtaatagaagctttagtggctcgcactcttcgccaggtggaatccacacagtccatg
atccgtattgtggggctttcagctacacttcccaattatctagaggttgcacaatttttg
agggttagtccagatgcgggtctctttttctttgactctagctaccgtcctgtgcctctt
gcacaacaatatattggaatcacagaaccaaactttcaagcacgtaatgaacttttgaat
gaagtttgctacaaaaaggttgctgattcattgaagcaagggcatcaggcaatggtgttt
gttcattcacgtaaagatactgggaaaacagctgataaattgatagagcttgcccggaag
tataacgaactagatctctttatgaatgaggaacatcctcagtttcatttggtcaagatg
gaggttgcaaagtccagaaacaaacagcttgttcagctatttggatcaggagttggcata
catcatgcagggatgctgcgtgctgacagaggtttgaccgaacgcctttttgctgatggt
ttgttaaaggtccttgtttgtacagcaacattggcatggggagtaaatctacctgcacac
actgttgtgattaagggtactcaattatatgacccaaaggctggtggatggcgagatctg
ggtatgctggatgtcatgcagatctttggacgtgctggaagacctcagtttgataaaagt
ggtgaaggcattataattacatctcatgataaattagcctactacctgagacttttgaca
agtcaacttcccatagaaagtcagttcattagctccttgaaagataacctaaatgcagag
gtaacactgggaactgtgacgaatgtgaaagaagcttgcgcatggcttggatatacgtac
cttttcataaggatgaaaatgaatcctttggcatatggtattggttgggatgaggttatt
gcagatccttcattgggtttgaagcaaagatctcttgtcacagatgctgcacgtgctctt
gacaaagctaaaatgatgcggtttgatgaaaaaagcggcaacttttattgtaccgaactt
ggtcgcattgctagtcacttctatattcattattctagtgttgagacatacaatgagatg
ctgagacgccatatgagtgatagcgagataattgacatggttgctcattcttcagaattt
gaaaatattgttgttagagaggaagagcagaatgaattagagacattgttacgcacagtc
tgtcctttagaagtaaagggtggtcctacaaataaacatgggaaagtgtctattttaatt
cagttatatatatctcgagggtctatagatgcattttccttaatttctgatgcggcatac
atcagtgccagcttggcgcgtataatgcgggccctttttgaaatctgtttgcgtagagga
tggtgtgagatgacatctttcatgttggagtattgcaaggctgtggatcgtcaaatatgg
ccccaccaacatcctctaagacagtttgacagagatatatcaccagaaatacttcggaag
ctagaagaacatgagattgacttagatcatcttcaagagatgaaggagaaggagattgga
gctatgattcgttatgcgcctgcaggaagggtagtgaagcagtatctagcgttttttcca
tcaatcatattgtctgctacaataagtccgatcaccagaactgttttaaaggtagatctg
gtcataactccagattttgtgtggaaagatcgctggcatggtgctgctcaacgctggtgg
attcttgttgaggattcagataatgatcatatctatcattcagagctttttacattaacc
aagcgagcagcaaaaggggacccgcaaaagctttcttttactgtgccaatatttgaacca
catcctccacaatactacattcgtgctgtttccgattcttggttgcaggctgaggctttt
tatacaatatcttttaagaaccttgccctgccagagagccatactactcacactgaactt
ctagatctgaagccacttcccgtgactgcacttggcaacaaggcttatgaagaactctat
agattttcacacttcaatcctattcaaacacaggcctttcatgttttgtatcacacacaa
aataacattctcttaggagctcctactggaagtgggaaaactatatctgcagagcttgct
atgcttcatttattcaattcagcccctgatatgaaggttatctacatagcaccattaaag
gccattgttcgagaaaggatgaatgattggaagaatggccttgttacaaaacttggaaag
aagatggttgaaatgactggtgattacacaccagatatgatggctcttatgtcagcagat
atcataatatcaacccctgaaaagtgggatggtattagtcgtaattggcacagtcgaagc
tacgtcacgaaggttggtcttatgattttggatgagattcacttacttggtgctgaccgt
ggacctattcttgaggtcatcgtctcaaggatgagatacatatcatcgcaaacggagcga
cctgttcggtttgttggtttgtcaacagcacttgcaaatgctcagaatctggctgactgg
ttgggagttgaggagattggtttgtttaatttcaagccaagtgtaaggcctgtgcctctt
gaagttcatatacaggggtatcctggtaaattctactgtccaagaatgaatagcatgaac
aagcccacctatgcagccatatgtacacattcaccaacaaagccagttctgattttcgtt
tcttctcgtcggcaaacacggcttactgcattagacctcatacagtttgcagcttccgat
gaacatccagtacagtttctagccatgccagaagacgcactacagatgattctttctcag
gtcactgatcaaaatctgagacacacgttacagttcggtattggtttacatcatgcagga
ttgaatgataaagatagatctttagtcgaggaactttttgcaaacaacaagattcaggta
ttggtttgcacaagtactttagcttggggggttaatcttccagctcatttggttataatt
aagggaacagagtattatgatgggaaagcgaagcgttatattgattttccaatcacagac
atcttgcaaatgatgggtcgtgcgggtcgtcctcagtatgatcaacatgggaaagctgtt
attcttgtgcatgaacctaaaaaaagcttctataagaagtttctttatgaaccatttcca
gttgaaagcagtcttagggaccaacttcatgatcacatcaatgcagagatagtttctggg
acaatttctcataagcaggatgcagtacattatctgacctggacatatctgttccgcagg
ctgatggttaatcctgcttattatggattggaagatagtgatcctcaaagtctaagttct
tacttatccagtcttgtgcaagatacatttgaagatttggaagatggtggatgtattaag
atggatgaagataatgtggagtctttaatgttaggctcagtagcttctcagtattatctg
aaatacatgacaatttccatgtttgcttcaaatataggcccagatacatctctcgaagtt
tttcttaatgtgctatctgctgcttctgaatatgatgaacttcctgtccgtcataatgag
gaaaattacaatgaagctttgtctgctaaagttccattagcagtggacaagaatcgcctt
gacgatccacatgttaaaacaaatttgctttttcaggcgcatttctctcaagttgaactt
ccgatcagcgactactatacagatttaaagtcagtgttggatcagagtatacgtatcatt
caagcaatgatagacgtttgtgcaaatagtggatggctctcgagttccgttacttgtatg
catcttcttcagatggtcatgcagggtatgtggtttgagagggattctcccctgtggatg
ctgccatgtatgactgaagaccttgtaacttcattgcaaaaaggaggaatatctagtatc
caacaactgctaaatctcacaaacacaaatatgcaatctaggtttggaaatattgcttca
agactacaacaggatttacaacattttcctcgtattcaagttaaactcaagatacaagga
ggggatgatggcaatgataatgttcccagtctcagtattcggttggagaaactcaaccgt
agaaaaacttcaagagcttttactcctcgttttccaaagttaaaagacgaagcatggtgg
ttggttcttggtaacactgccacctcagaattacatgctcttaaaaggatttccttcacg
gatcgtttggttacccgcatgaagttaccgtcaaccacaactagttttcagggaatgaag
ctgctgcttgtttcagattgttatcttggttttgatcaagaatactcgattgaagaactg
atggagtcttag
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integrated database retrieval system
