Bidens hawaiensis: 143560997
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Entry
143560997 CDS
T11418
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143560997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143560997
03110 Chaperones and folding catalysts [BR:
bhw03110
]
143560997
03029 Mitochondrial biogenesis [BR:
bhw03029
]
143560997
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhw04147
]
143560997
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
143560997
Messenger RNA biogenesis [BR:
bhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
143560997
Chaperones and folding catalysts [BR:
bhw03110
]
Heat shock proteins
HSP60 / Chaperonin
143560997
Mitochondrial biogenesis [BR:
bhw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
143560997
Exosome [BR:
bhw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143560997
Exosomal proteins of other body fluids (saliva and urine)
143560997
Exosomal proteins of breast cancer cells
143560997
Exosomal proteins of colorectal cancer cells
143560997
Exosomal proteins of bladder cancer cells
143560997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Nbl1_Borealin_N
Motif
Other DBs
NCBI-GeneID:
143560997
NCBI-ProteinID:
XP_076905278
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MYRVAAAAVSSSIRSSTSRKLVMASGTVIWSRNYVAKDIQFGTRARAAMLLGVNQLAEAV
KVTMGPKGRNVIIEQSFGSPKVTKDGVTVAKSINFEDKLKNVGANLVKQVASATNSTAGD
GTTCATVLTQAIFNEGCKSVAAGVNVMDLRSGINMAVNAVITELKSQALMISTPEEITQV
ATISANGEREIGELLARAMEKVGKEGVITVADGNTLDNELEVVEGMKLGRGYISPYFVTD
TKTQKCELEHPLIFIHDKKISDINALVKILEISVEKRRPLLIVAEDIESELLAMLIINKR
QAGLKVCAIKTPGFGDNRRVNLEDLAVLTGGEVISEERGLTLNDVRLEKLGTAKKVTVSL
DDTIILHGGGDKKQIEERCEELRSTIENSTAMFDKEKAQERLSKLSGGVAVFKVGGASEA
EVGERKDRVTDALNATRAAVEEGIVPGGGVALLYATRVLKSLQTANEDQKRGVEIVENAL
KAPTFTIISNAGGDGATVIGKLLEQDDLHYGFDAAQGKYVNMVKAGIIDPLKVVRTALVD
TASVSLLLTTTESTIVDRQGEKNPLANRMPNMDDMGMGY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgagtggccgcagcagcagtgtcttcctcgatcaggtcctcgacatcaaggaag
ctggtaatggcatctggtacagttatatggagcagaaactatgttgcaaaagatatccag
tttggaaccagggctcgggctgcgatgttgcttggtgtgaaccagcttgctgaagctgta
aaagtcacaatgggacccaaggggcgtaatgttattatcgagcaaagttttggaagtcca
aaggtcacaaaagatggcgtaactgtagccaaaagcatcaactttgaggataagttgaaa
aatgttggtgctaatttggtgaaacaggttgccagtgcaactaattctactgctggagat
ggtacaacatgtgctactgttttgactcaagcaatattcaatgaaggttgcaaatctgta
gctgcaggtgtaaatgtcatggatttacgaagtggtatcaatatggcagtaaatgctgtt
ataactgaactgaaaagtcaagcgttgatgattagtacgccagaagaaattacacaggta
gccactatctctgccaatggagaacgagaaattggcgaactgctggcaagagctatggag
aaagttggtaaagaaggcgttattaccgttgctgatggtaatactttggataatgagcta
gaagttgtggaggggatgaagctaggccggggttacatctctccttattttgttaccgac
acaaagacacaaaaatgtgaattggagcatccattgatctttattcatgacaaaaaaatt
tcagacattaacgcacttgtcaaaatcttggagatttctgttgagaaacgtagacccttg
ctgattgtggctgaagatattgaaagtgaactactggcaatgctgatcattaacaagcgt
caagctggacttaaggtatgtgcaattaaaactcccggttttggagataataggagagtc
aatttagaggatttggcagtgcttacaggaggggaggttataagcgaggaacgtggatta
accttaaatgatgttcgacttgagaaacttggtactgcaaaaaaggttactgtatctctt
gatgatactataattctacacggtggtggcgataagaagcaaattgaagaaagatgtgaa
gaattacggtcaaccattgagaatagtacagccatgtttgacaaagagaaagctcaagag
aggttgtcgaagttgtcaggtggcgttgcagtcttcaaggttggaggagctagtgaggcc
gaagttggagaaagaaaggatagggtaacagatgctttaaatgccacaagagcagcagtg
gaagagggaatagttccaggtggtggggttgccctactatatgctactagggttcttaaa
agccttcaaactgcaaacgaggatcagaagagaggagttgaaatagttgaaaacgccctt
aaggcgcctacgtttacaataatttcaaatgccggtggtgatggtgccacggttattggc
aaactattggaacaagatgatcttcattatggatttgatgcagcccaaggcaaatatgtt
aacatggtgaaggctggaattatagatcctctaaaagttgtgagaacagccttagtagac
actgccagtgtctcgttattgttgaccaccacagagtcaaccattgtggatcgtcaagga
gagaaaaacccacttgccaataggatgccaaatatggatgatatgggaatgggatattga
DBGET
integrated database retrieval system
