Bidens hawaiensis: 143564211
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Entry
143564211 CDS
T11418
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143564211
09123 Folding, sorting and degradation
03018 RNA degradation
143564211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143564211
03041 Spliceosome [BR:
bhw03041
]
143564211
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143564211
mRNA degradation factors
5'-3' decay
Lsm complex
143564211
Spliceosome [BR:
bhw03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
143564211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
GRP
Motif
Other DBs
NCBI-GeneID:
143564211
NCBI-ProteinID:
XP_076907675
LinkDB
All DBs
Position
Unknown
AA seq
160 aa
AA seq
DB search
MDVRFYLGIDCDLVFASFMCVEDNTIEIETPGHLPLSLLRTTMGHPMLVELKNGETYNGH
LVNCDTLMNIHLREVICTSMDGLKFWRMPECYIRGNTIKYLRVPDEVIDKVQDEKSRADR
KPPVIGRGRGRCHDGGGRGRGRGVPGGRTGGYRGGGRGRW
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacggttctatcttggcattgattgtgaccttgtttttgctagcttcatgtgt
gtagaagataatacaattgagattgagactccaggacaccttcctctatctctactaagg
acaacaatgggccatcctatgctagttgaattgaaaaatggggagacatacaatggccat
ttggttaactgtgacacattgatgaacattcatctccgtgaagttatatgcacctcaatg
gacggcttgaagttttggcgaatgcctgaatgttacattcgtggtaatacaatcaagtat
cttagagttccggatgaggttattgataaggttcaagacgaaaagagtcgtgcagacagg
aaaccacctgtgataggacgtggaagaggaagatgccacgacggaggtggtagagggcgg
ggcaggggcgtgccaggtggcaggaccggtggatacagaggtggagggcgtgggcggtgg
taa
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integrated database retrieval system