KEGG   Bidens hawaiensis: 143564211
Entry
143564211         CDS       T11418                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
bhw  Bidens hawaiensis
Pathway
bhw03018  RNA degradation
bhw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143564211
  09123 Folding, sorting and degradation
   03018 RNA degradation
    143564211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhw03019]
    143564211
   03041 Spliceosome [BR:bhw03041]
    143564211
Messenger RNA biogenesis [BR:bhw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     143564211
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     143564211
Spliceosome [BR:bhw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    143564211
SSDB
Motif
Pfam: LSM SM-ATX GRP
Other DBs
NCBI-GeneID: 143564211
NCBI-ProteinID: XP_076907675
LinkDB
Position
Unknown
AA seq 160 aa
MDVRFYLGIDCDLVFASFMCVEDNTIEIETPGHLPLSLLRTTMGHPMLVELKNGETYNGH
LVNCDTLMNIHLREVICTSMDGLKFWRMPECYIRGNTIKYLRVPDEVIDKVQDEKSRADR
KPPVIGRGRGRCHDGGGRGRGRGVPGGRTGGYRGGGRGRW
NT seq 483 nt   +upstreamnt  +downstreamnt
atggatgtacggttctatcttggcattgattgtgaccttgtttttgctagcttcatgtgt
gtagaagataatacaattgagattgagactccaggacaccttcctctatctctactaagg
acaacaatgggccatcctatgctagttgaattgaaaaatggggagacatacaatggccat
ttggttaactgtgacacattgatgaacattcatctccgtgaagttatatgcacctcaatg
gacggcttgaagttttggcgaatgcctgaatgttacattcgtggtaatacaatcaagtat
cttagagttccggatgaggttattgataaggttcaagacgaaaagagtcgtgcagacagg
aaaccacctgtgataggacgtggaagaggaagatgccacgacggaggtggtagagggcgg
ggcaggggcgtgccaggtggcaggaccggtggatacagaggtggagggcgtgggcggtgg
taa

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