Bidens hawaiensis: 143564373
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Entry
143564373 CDS
T11418
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bhw Bidens hawaiensis
Pathway
bhw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
143564373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143564373
03036 Chromosome and associated proteins [BR:
bhw03036
]
143564373
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
143564373
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
143564373
Chromatin remodeling factors
BAF complex
143564373
PBAF complex
143564373
GBAF(ncBAF) complex
143564373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
HDA2-3
Bromodomain
AAA_14
DUF2996
Motif
Other DBs
NCBI-GeneID:
143564373
NCBI-ProteinID:
XP_076907786
LinkDB
All DBs
Position
Unknown
AA seq
1973 aa
AA seq
DB search
MQSGGGGPPSASASPSSSSAPAVSRFDPVKHQQQQQQMQLLQQQLLRNPEGREAMLAYQA
GIRQGVSGLGSGSMQQMQQQHGQDEGQNTRHGFDQHMSPMQQAYMQYAQQAQQAQQKSSP
GMQVQQAVSSQSQNQIQKHFGIPASFGQMIPGSNMGQMQVSQGQQGINNMGNSQVAMAAQ
MQAMQALALERNIDLSRPENVNLMAQIMPIMQSRMFGQQKVNESNTGPHSPQVANASSPH
SDVSGHSGSTKARQAMSPGHPGSTQNTPLVNTSSGGQGQQFPIQGRENQMAPRQSMPPPQ
SLANMSQNSDHFSKNMVTGPESLQIQHARQQIDNPLTSQKVQKLPPGFTKQQFHVLKAQI
LAFRRIKKGEKTLPRELLQAIAPPPLEVQLQQITAPAGRNLMDSNNKDLQAVMNFPKREV
HKEKETAGSTANAQSTTVINETPSVSLPAKEELRNPSLPTKQEHEVEHVIPKTSHVAEGS
TDKGKAVVSQSGDPTQTKDPGPSRKYHGPLFDFPFFTRKHDSFGSSMMLNNNNNLTLAYD
VKDLVIDEGIDMINKKKNESLKKINSLLAVNLERKRIRPDLVIKLQIEEKKLLLQDVQAR
VREEVDQQQQHIMAMPDRPYRKFIRLCERQRLDLNRQVQAAQRIIRKNQLKSLFQWRKKL
LESHWAIRDARTSRNMGVAKYHEKMLREFWNEDDDISKRMEALKNNDVERYREILLEQQN
NVPSEAAERYEVLSSFLSQTEDYLNKLGGKLTAAKNQQEAEEATNAAAAVARAQGLSEEE
VRAAASRAREEVLIRNRFTEMNAPQDSSSVSKYYTLAHAVSERVTRQPSMLRKGTLRDYQ
LVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEYKSNYGPHLIIVPNAVLVNW
KSELRTWLPNASCIYYVGNKDQRTKLFTQEVRRQKFNVLVTTYEFIMFDKSKLSRVDWKY
IVIDEAQRMKDRDSVLARDLDKYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKV
FHEWFSQPFQKDGAHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKISI
ILRCKMSAIQGVIYDWIKATGTIRVDPEDEKRKVQKSSIYQAKTFKPLKNKIVELRKTCN
HPLLTYPFFNDLSKEFLVKSCGKLWVLDRILVKLQRTGHRVLLFSTMTKLLDILEEYLQW
RRLVYRRIDGTTSLEDRESAIVDFNSPDTDCFVFLLSIRAAGRGLNLQTADTVIIYDPDA
NPQNEEQAVARAHRIGQTREVKVIYMEAVVDQVSSHQKEDNLRNGGSVDSDDDLAGKDRY
VGSIESLIRNNIQQYKIEMADEVINAGRFDQRTTHEERRSTLESLLRDEERYQETVHDVP
SLQKVNRMIARSEEEVEIFDQMDEEFDWTDEMTQYDQVPKWLRAGTREVNSTIARMSKKP
LKNTLFTDNIGVESSEMGSDVRRARLKGKKFLNYAELDDTDLYEASSEEIADAAAAAAEE
EQEQEQEAADSDNDDDDDDDDDDETAPVVDQSQSEEDDIIPASRQNNMLQEPGSSGSSSD
SKRSTPMTIPSISSKKFGSLSALVVQPKLKRKRSIRVRPQPAVTRQDNKSIDRSSLLRGP
SSHLPFQADRKLVKENNAYKNEQSSSSVKAKQTPPARKISGQPTRTNPISGPSENSNVKK
GSGSFGGTMMTEAIQRRCKNVITKIQRRIDKEGQQIIPLLTDLWKRTESPRGGSGNSLDL
RKIELRVDRLEYNGVTDLIVDVQLMLKTGMQFFGFSHEVRSEARKVHDLFFDIMKIAFPD
TDFREARSALTFSGPTASSSPRGLMASSSPRGPMASSSPKGLQPIGQTKRTKQTNNPEPE
PRHPSRPLSRWSIPARETRFGNTSSGGAGSSHGLEESKPLSHPGDLVTCKKKRKDRAGPV
SPVRRGIRSPGQSRPSQSQTVGQQGSGGGASVGWANPVKKMRTDVGRRRPNQQ
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggcggtggaggaccgccgtcggcgtctgcatcgccgtcgtcttcgtcggcg
ccggcggtgtcgcgatttgatccggtgaagcatcaacagcagcagcagcaaatgcagtta
ttgcaacaacagttacttagaaaccctgaagggagagaagctatgttagcatatcaagct
ggaatcaggcaaggagtatcgggattgggttcgggctctatgcaacaaatgcaacagcag
catggtcaagatgaaggacaaaatacaaggcatggttttgatcagcacatgagcccaatg
caacaagcatatatgcaatatgctcaacaagcccaacaagcccaacaaaagtcatcaccg
ggtatgcaagtccagcaggcggtttctagtcaaagtcaaaatcaaattcagaagcatttt
ggcataccagcatcgtttggccagatgataccagggagtaatatgggacaaatgcaagtc
tcacaaggtcaacagggtatcaataatatgggaaacagccaggtggcgatggctgcccaa
atgcaggcaatgcaggctttggctctcgagcgtaacattgatctttcacgtcctgaaaat
gttaatttaatggcacaaataatgccgattatgcagtctaggatgtttggtcaacaaaaa
gtcaatgaaagcaacacgggcccacattctccacaagtggcgaatgcaagttctccccat
agtgacgtgtcgggtcattcgggctctacaaaagcaaggcaggcaatgtcgcctggtcat
ccgggttcaacccaaaatacccccttggtcaacacttctagcggtggtcaaggtcaacag
ttccctattcaagggagggagaatcaaatggcacctaggcaatctatgccgcccccacag
tcacttgctaacatgagccagaattcagatcattttagcaaaaacatggtaactggccca
gagtcgttgcaaatacagcatgctagacagcaaatagataaccctttaacatctcagaaa
gtacaaaaattacccccgggctttacaaaacagcaatttcatgttcttaaagcccaaatt
cttgcttttaggcgtataaagaaaggagagaaaactctgcctcgtgaactacttcaagct
attgcaccgcctccacttgaagtgcagttgcagcagattactgcccctgctggtagaaat
cttatggattccaataacaaggatcttcaggctgtgatgaattttccaaaaagagaagtg
cacaaggagaaagaaactgcgggttccacagctaatgcacaaagtacaactgtaattaat
gaaactccatcagtttctctccctgcaaaagaagagctgagaaatccttcactacctacc
aaacaggaacacgaggtagagcatgtgattccgaaaacttctcatgtagctgagggttcc
acagacaaaggtaaagctgttgtctcacaatcaggagatccaactcaaacaaaagatccg
ggtccttctagaaagtaccatggcccattgtttgactttccttttttcactcgcaagcat
gattcttttggatcaagtatgatgctcaataacaataacaatctaactctagcatatgat
gtaaaagatcttgttattgacgaaggcatagacatgattaacaaaaagaaaaacgagagt
ttaaaaaagattaacagtttactagctgtaaatttggagagaaaaaggataaggccagat
cttgttataaagttacagattgaagaaaagaaacttctcttacaagatgtacaagcacgt
gtgagagaagaagttgatcaacaacaacaacatataatggctatgccagatagaccgtat
aggaaatttattcggttatgtgaacgccaacgactggatcttaacagacaagtacaagct
gctcaaagaatcattagaaagaaccagttgaaatctctttttcagtggcgtaagaagctt
ctagaatctcactgggctattcgtgatgcacggacttcacgtaacatgggtgttgccaag
tatcatgagaagatgttgagggaattctggaacgaagatgatgatattagtaaaagaatg
gaagctttgaagaataatgatgttgagaggtatagagagattcttctagagcaacaaaat
aatgtgcccagtgaggctgccgagagatacgaggttttatcctcgtttttatctcagact
gaagattatcttaataaactcggtggcaaacttacagctgccaagaatcaacaggaggct
gaggaggctacaaatgctgcagctgcagttgcaagagctcagggtctatccgaagaagag
gtaagagctgccgcatctcgtgcgagagaagaagtattaataagaaaccgctttactgaa
atgaatgcacctcaagatagttcatctgttagcaaatattatactcttgcacatgctgtc
agtgaaagagtcacacgacagccatcaatgctaagaaaaggaactctacgtgactatcaa
cttgttggattgcagtggatgctttcattatataacaataagttgaatggtatattggct
gatgaaatgggccttgggaaaactgtccaggttatggctttgattgcttatctgatggag
tacaaaagtaattatggcccacatcttataattgttccaaatgctgttctggttaactgg
aagagtgagttgcgtacttggttgccaaacgcgtcttgcatttattatgttggtaacaaa
gatcaacggacaaaattgtttactcaggaggttcgccgtcagaaatttaatgtacttgtg
acaacctatgaatttatcatgtttgataaatcaaaactttctagagttgactggaaatat
atagttattgatgaagcacaacgaatgaaagaccgagattcggttctagcccgtgatctt
gataaatatcgatgtcaaaggcggctacttctcactgggacccccttacagaatgatctt
aaagagctctggtcattgttaaatctattacttccagacgtgtttgacaaccgaaaagtg
tttcatgaatggttttcacagccttttcagaaagacggtgctcacaatgctgaagatgat
tggctcgaaactgagaaaaaagttattattatacatcgacttcatcaaatcttggagcct
tttatgcttaggcgtcgtgttgaagatgttgaaggctcacttcctccaaagatctccatc
atattaagatgtaaaatgtcagctatccaaggtgtgatatatgattggatcaaagcaact
ggtacgattcgggttgacccggaagacgagaaacggaaggtacaaaaaagctcaatatac
caagccaagacattcaagccattgaagaataaaatcgtggagcttcggaaaacgtgcaac
catcctttgcttacttacccgttttttaacgatctatcaaaagaattccttgttaaatca
tgtggcaagttatgggttcttgatagaatcctagtaaagcttcaaagaactgggcatcgc
gtgcttttgtttagtacaatgacaaagcttctagatattttagaggaatatttacagtgg
cgtcgacttgtttaccgaaggatcgatggtacaacgagcttggaagaccgtgagtcagca
attgttgactttaacagcccagatactgattgttttgtttttttactcagcattcgtgca
gctggacgaggtttaaatcttcaaacagctgacacggttataatatatgatcctgatgcg
aaccctcaaaatgaggaacaagccgttgcgagagctcatcgtattggtcaaacacgggaa
gtcaaagttatttacatggaagccgtggttgaccaagtttctagtcatcaaaaagaggat
aatttaaggaacggaggtagtgttgactcggatgatgacctggcaggtaaagatcgttac
gtaggatctatcgaaagtttgataagaaataatattcagcaatataagattgagatggct
gatgaggtcataaatgctggaaggtttgaccaaagaaccacacatgaagaaagacggtca
actttggaatcattgttacgtgatgaagaaaggtatcaagaaacggttcatgatgtcccg
tcacttcaaaaagtgaatcgaatgattgctagaagtgaagaagaagtcgagatttttgat
caaatggatgaagaatttgattggacggatgagatgacgcagtacgatcaagttcctaaa
tggctccgtgctggcactcgagaagtcaactctactattgctagaatgtccaaaaagccc
ctgaagaacactttatttaccgataacattggtgtggaatcaagtgaaatgggttcagat
gttagaagggcccgacttaaaggaaagaagtttttgaattatgcggagctggacgacaca
gatctctatgaagcttcatctgaagagattgcagatgccgcagcagcagcagcagaagaa
gaacaagaacaagaacaagaagctgcagactctgataatgatgatgatgatgatgatgat
gatgatgatgaaactgcacctgtagttgaccaaagtcaatctgaagaagatgatattatt
cctgcttcaagacaaaataatatgcttcaagaaccgggctcatcaggatcatcttcagat
agtaaacgatcaactccaatgacaattccttcaatttcttccaagaaattcggctcgctt
tctgcattagttgtgcaaccaaagttaaaacgcaaacgtagtattcgtgttcgaccgcag
cctgctgtaacgaggcaggataacaaatctattgaccggtcttctcttcttcgcggtcca
tcctctcacctgccttttcaagctgaccgaaaattggttaaagagaataatgcttacaag
aatgaacaaagcagctcctcggtgaaggctaaacaaactccccctgcccggaaaatttcc
gggcagcctacaagaacaaatcccatatctggtccttctgaaaactctaacgtaaagaaa
ggaagtgggtcttttggtgggaccatgatgactgaggcgatccaaagaaggtgcaaaaat
gtaatcaccaagatccagaggcgaattgacaaagaaggccaacagattattccattgcta
actgatttatggaagagaaccgaaagtcccaggggcggttctggaaatagtcttgatcta
agaaagattgagctgcgggttgaccgactggagtacaatggagttactgatctcattgtt
gacgtgcagcttatgttaaaaactggaatgcagttcttcggattttcacacgaggtgagg
tctgaagcaaggaaggtgcacgatcttttcttcgacataatgaaaattgcatttcccgac
accgacttccgtgaagcccggagtgcactcactttctcgggtccgacggcttcctcatct
cctagagggctgatggcttcctcatctcctagagggccgatggcttcctcatctcctaaa
gggctacaacccattggtcaaaccaagcgaacaaaacagacgaataacccagagccagag
ccacgtcacccatcgagaccactttctcgttggtccattcccgctagagaaacaaggttc
gggaacaccagcagtgggggtgcgggttcgtctcatggtctggaagaatctaaaccgctt
tcccatccaggtgatcttgttacctgcaagaagaaaaggaaagatagagctggtcctgtc
tcgcctgttaggcgtgggattaggagcccaggtcaaagtaggccgagtcaaagtcaaact
gttggtcaacaaggaagtgggggtggcgctagcgttggttgggctaaccctgttaagaaa
atgaggacagatgtagggagaagaaggccgaatcaacaatga
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integrated database retrieval system
