Bidens hawaiensis: 143565647
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Entry
143565647 CDS
T11418
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143565647
03036 Chromosome and associated proteins [BR:
bhw03036
]
143565647
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
143565647
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
143565647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143565647
NCBI-ProteinID:
XP_076908670
LinkDB
All DBs
Position
Unknown
AA seq
1557 aa
AA seq
DB search
MAGNTILSDEEDEIEVEEDEREEPEGEDVAPEDRDDEDDEEDEEGQDEYEKDGFIVDDID
EDEQHGEEEDRMDSDEGRQRKKKRKKRESEKNYVLDEDDYELLQDNVGFRRPKVESKKFK
RLKKARADADDGQSGFSDEEEYDMTGKGGRSAEDKIKRSLFDDDEGPPLEDIAGEDQPEE
EDGDIGEEEDEMADFIVDEEEVDEHGEPTGRRKVNRKKSRQAPGISSTAIQEAHDIFGDV
DELLRQRKSEISRYDERGEGRERRLEDEFEPIILSEKYMTEKDDHIREIDIPERMQISEE
STGPPPTDAISISDESIWILNQLGMGTVPFFRKEGHELAVDKGDIYRFLEFMHVQKLDVP
FIAMYRKEECRSLFEDQEPQDNNPEEKPMLRWHKLLWAILELDRKWLLLQKRKSALQSYY
NNRFEQERSIYDETRLHLNQKLFDSITKSLKVAESEREIDDVDAKFNLHFPPADVAVDEG
RFERHKNSQFKRPKRKSQYSICSKSGLWEVATKFGYGSEEFGLLISLEEMRTDELEDAKE
TPEEVASRFTCAMFEDPQAVLRGARHMAAVEISCEPCVRRHVRSIFMDNAVVSTNPTADG
NVSIDSRHQFAGIKWLKNKPLTKFNDAQWLLIQKAEEEKLIQVSVKLPSSIHVQLINDAH
NYYLSDGVSKSAQLWNEQRKQIINDAFDGLLLPSMAKEARALLTSRAKNWLLMEYGGRLW
DKVSVAPYQKKENDNSSDDYEAAPRVMACCWGPGKPTTTFVMLDSYGEVLDVLYAGSLSL
RGQNANDQQRKKNDQQRVVKFMTDHQPHVAVLGAVNLSCLKLKEDIFEIIFKMVEDNPRD
VGHEMDGINIIYGDETLPHLYENSRISSEQLQPQTGIVKRAVALGRYLQNPLAMTATLCG
PAKEILSWKLIPLENFLTPDEKYSMVEQIMVDATNQVGLDINLAISHEWLFAPLQFISGL
GPRKAASLQRSLVRASSIYTRKDLLNHGLGKKVFVNAVGFLRVRRSGNAASSSQFIDLLD
DTRIHPESYSLAQELAKDIYTADDDQDDVNDEDVLEMAIEHVRENPDRLKSLKVDEYAKS
KKRENKKDTLIHTKLELIQGFQDWRKPYTEPNQDEEFYMITGETEETLSEGKIVQATVRR
VQPQKAICVLDSGLTGLLSKEDYSEDRRDNDLTEKLVEGEILTCKIKSIQKARHQVFLSC
KESDLRDDRSQNNKALDPYYHEDRDNFDNEKEKARKAKELAKKHFKPRMIVHPRFQNITA
DEAMEMLSDKEPGESIIRPSSRGHSYLTLTLKIYDGVYAHKDIIEGGKENKDFTSILRLG
KTLKIGDDVFEDLDEVIDRYVDPLVTHLKTMLAYRKFRDGSKAEVDESLRKEKNENPSRI
VYSFGISYEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKKMFEEIDRLVAYFQRHIDDP
QDAGPSIRSVAAMVPMRSPATGGSGSWGPSGDRERTSTPGSRTGRSDYRNGGSHDEHPSG
LPRPYSGGGGRRRGGRGGRGSYSSRDVGFSGGDSGSSKRSSVQSQTGGSGAGWGSGW
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaacaccatattatccgacgaagaagatgagattgaagttgaagaggacgaa
agagaggagcctgaaggcgaagatgtcgcgcctgaagatcgtgacgatgaggatgacgaa
gaagacgaagaagggcaagatgaatatgagaaggatggttttatagtggatgatattgat
gaagatgaacagcacggggaggaagaagataggatggatagtgatgaggggagacaaagg
aagaagaaaagaaagaagagagagtcggaaaagaactatgttcttgatgaagatgattat
gagcttcttcaagataatgtcggttttcgacgcccaaaagttgagagtaaaaagtttaag
cgattaaagaaagcaagggctgatgctgatgatgggcaatctggattctctgatgaggag
gaatatgacatgactggaaaaggagggcgaagtgcagaggataagattaagcgtagttta
ttcgatgatgatgaaggtccaccattagaggatattgctggagaggatcaacctgaagaa
gaagatggcgacattggtgaagaggaggacgaaatggctgactttattgtcgatgaagaa
gaggttgatgaacatggcgagccaacagggagaagaaaggttaacaggaaaaaatccagg
caggctccagggatctcatcaactgcaattcaagaggctcatgacatatttggtgatgtg
gatgagcttttgaggcaaagaaaatcagaaatcagcaggtatgatgaaaggggtgaaggg
agagaaagaaggctagaagacgagtttgaaccgattattctttctgaaaaatacatgact
gagaaagatgatcatatacgggaaatagatattccagaaagaatgcagatttctgaggaa
agcacgggacctcctccaacagatgcaataagtataagtgatgagagtatttggattctt
aaccaacttggaatgggcacggtaccttttttccgcaaagaagggcatgaactggcagta
gacaagggtgatatttatagatttttggaatttatgcatgttcaaaaattggatgtacca
tttattgctatgtacagaaaggaagagtgccgtagtctttttgaagatcaagagccacaa
gataataatcctgaagaaaagcccatgctgaggtggcacaagctactttgggctatcttg
gagttagatagaaagtggttactgcttcaaaaacgaaaaagtgcgctacaatcgtactac
aacaatcgatttgaacaagaaagaagcatatacgatgaaacacgtcttcatttgaatcaa
aaactgttcgattcaatcacaaagtccctcaaagtcgctgagtcagaacgagaaattgat
gacgtggacgcaaagtttaacctccatttcccccctgctgatgtggctgtggatgaaggg
cggtttgagagacataagaactcacagttcaagagacccaagaggaaatcacagtatagt
atttgtagtaaatctggattatgggaagttgccaccaaatttggctatggctccgaagaa
tttggattgctgatatctcttgaagaaatgagaaccgatgaattagaagatgcaaaggaa
acaccagaagaagttgcttcaagattcacatgtgcaatgtttgaggatcctcaagctgtt
ctcaggggtgctaggcatatggcggcagttgagattagttgtgagccatgtgtcaggagg
catgttagaagcatcttcatggataacgctgtggtgtcaaccaatcccactgctgatgga
aacgtgtcaattgactcacgccatcagtttgcagggatcaagtggttaaaaaacaaaccg
ttgactaaatttaatgatgcacagtggcttcttatacaaaaggctgaagaagaaaaactt
atacaagtttctgtaaagcttccatcatctatccatgttcaactaattaatgatgctcat
aattattaccttagtgatggcgtgagtaaatctgctcagttatggaatgaacaaagaaag
cagataataaatgatgcgtttgatggtttgcttttaccttcaatggcaaaagaggcaaga
gctttgttaaccagtagagctaaaaactggctactgatggaatatggagggcgtttatgg
gataaagtctcggtggcaccttatcagaaaaaggagaatgataactcatctgatgattat
gaagctgcaccaagagttatggcatgctgttggggcccggggaagcccacaactacgttt
gtgatgttggattcatatggtgaagttcttgatgtgctgtatgcgggatccttaagctta
cgtggtcaaaatgctaatgatcaacaacgtaaaaagaatgaccagcaacgtgttgttaag
ttcatgacagatcatcaacctcatgttgctgtccttggtgctgttaatttatcttgttta
aagctcaaggaggatatttttgagatcatttttaagatggtagaagataacccgagagat
gttgggcatgaaatggatggtataaacattatatatggtgatgagacactcccacatttg
tatgaaaactcacggatatcatcagaacagcttcaaccacaaacgggcattgttaagcga
gctgtggctcttggacgttaccttcaaaatccgttagcaatgactgctactttatgtggg
cccgcaaaagagatattatcttggaaacttattccgttagaaaattttttaacacctgat
gaaaaatacagcatggttgaacaaatcatggtagatgcaaccaaccaagtgggcctagat
ataaatttagccataagtcatgaatggttatttgctcctttacaattcatatccgggctt
gggccgagaaaggcggcttcattacaacggtccttagtacgggctagctccatatacacc
cgtaaagacttgctgaaccacgggctcggtaaaaaagtgtttgtaaacgcagttgggttc
ttacgggttcgtcgaagtggaaacgctgctagcagtagtcaattcattgacttgctagac
gatacacgaatccaccctgaatcatacagtctcgcacaggaattagctaaagatatttac
actgcagatgatgatcaagatgatgtaaacgatgaagatgtgcttgaaatggcgatcgag
cacgtgagagaaaaccctgatagattaaaaagtcttaaagtcgacgagtatgcgaagtct
aaaaaacgcgagaataaaaaagatacgttaattcatacaaagttagagttgattcaaggg
tttcaagattggcgtaaaccgtataccgaaccgaatcaagatgaagaattttatatgata
accggggagacggaggagactctttctgagggtaaaatcgtccaagcgactgttcgtagg
gttcaacctcaaaaggcaatatgcgttcttgactcggggttgaccggtctgctcagtaaa
gaagactatagtgaagaccgtagagacaatgatttgactgagaagttggttgaaggcgag
attttaacgtgtaaaataaaatcaattcaaaaggcccgtcaccaggtgttcttaagctgt
aaagaaagtgatttaagagatgaccgatcccaaaacaataaagccttggatccttactat
cacgaagaccgtgataactttgataatgaaaaagaaaaggcccgtaaagctaaagagtta
gcaaagaagcatttcaaaccaagaatgatcgttcaccctcggtttcagaatattacagct
gatgaggcaatggagatgttatctgataaggaacctggtgagagtataattcgaccgagc
tcacgcgggcactcctacttaacgttaacacttaaaatctatgacggtgtttatgcacac
aaagatataattgaaggtggaaaggagaataaggattttaccagcatattgcgtctcggg
aaaactttgaaaataggagatgatgtgtttgaagatcttgatgaggtaattgaccgttat
gttgacccgctagtaactcacttgaaaacaatgctggcataccggaagtttagagacggt
agtaaagctgaagtcgatgaaagtttaagaaaagagaaaaacgagaacccgtcaaggatt
gtgtactcatttgggatatcgtatgagcatccgggcacgtttattttaacttatataagg
agttcaaatccgcatcatgaatatgttggattgtatccaaaagggtttaaattccgcaag
aaaatgttcgaggaaattgaccgacttgtggcgtatttccaaagacatattgatgaccca
caagacgcgggcccgtcaatacggtctgttgctgccatggtgccgatgcgcagccctgca
acaggcggttctggtagctggggcccgtctggggatcgagaaagaacatctactccggga
tctagaacaggtcggagtgattataggaatggtggcagtcatgacgaacatccaagtggt
ttgccacgtccctatagcggtggtggtgggcggcggcgggggggccgaggtggacgaggg
tcatatagcagccgagacgtgggattttctggtggcgacagtggcagtagtaagagaagt
tctgtgcaatcacagacaggagggagtggtgctgggtggggcagtgggtggtaa
DBGET
integrated database retrieval system
