Bidens hawaiensis: 143565911
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Entry
143565911 CDS
T11418
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143565911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143565911
03110 Chaperones and folding catalysts [BR:
bhw03110
]
143565911
03029 Mitochondrial biogenesis [BR:
bhw03029
]
143565911
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhw04147
]
143565911
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
143565911
Messenger RNA biogenesis [BR:
bhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
143565911
Chaperones and folding catalysts [BR:
bhw03110
]
Heat shock proteins
HSP60 / Chaperonin
143565911
Mitochondrial biogenesis [BR:
bhw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
143565911
Exosome [BR:
bhw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143565911
Exosomal proteins of other body fluids (saliva and urine)
143565911
Exosomal proteins of breast cancer cells
143565911
Exosomal proteins of colorectal cancer cells
143565911
Exosomal proteins of bladder cancer cells
143565911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
UTP20
Motif
Other DBs
NCBI-GeneID:
143565911
NCBI-ProteinID:
XP_076908859
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MASANAISTPSILSSHTKGNLINGSSRRIGQLQTAQKTRQSNNRRFAIRASAKDIAFDQR
SRAAMQAGIDKLADVVGLTLGPRGRNVVLDEYGAPKVVNDGVTIARAIELPHAMENAGAA
LIREVASRTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVLGLVEELE
KRARAVKGRDDIKAIASISAGNDDIIGTMIADAIDKVGPDGVLSIESSSSFETTVDVEEG
MEIDRGYVSPQLVTNPEKLLVEFENARVLVTDQKISSIKEIISILEQTTQLRAPLLIIAE
DITGEALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAIVTGAEYLASDLGLLVENA
TVEQLGTARKITVSKDSTTIIADAATKDEIQSRIAQIKKELYETDSVYDTEKLSERIAKL
SGGIAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTLVPAIKDT
LEDADERLGADIIQKALVAPAALIAQNAGVEGEVVVEKVKESEWDMGYNAMTDKYENLVE
SGVIDPAKVTRCGLQNAASVAGMVLTTQAIVVEKPKPKAPVAAAPQGLTV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctaatgctatatccacaccttcaatcctctcttcacacaccaagggcaat
ttgattaatggaagtagtaggaggattggtcagttgcagactgctcagaagacgaggcaa
tctaataataggcggtttgcgattcgtgcttcggctaaagatattgcgtttgatcagcgt
tcgagagccgctatgcaggccggtatcgataaacttgcagacgttgttggacttactctt
ggccctagaggaaggaatgttgttttagatgaatatggtgccccgaaggtggttaatgat
ggagtaacaatagccagagctattgaactacctcatgccatggaaaatgctggtgctgct
cttatcagagaggttgcaagtagaactaatgactcagctggtgacggtaccaccaccgca
tcggttcttgcccgtgagattattaaacttgggcttctaagtgtcacctccggtgctaac
ccggtgtcattgaagaaaggtattgataagacggtattgggtttagttgaggagctggag
aagagagccagggctgtgaaaggccgtgatgacattaaagccattgcttcaatctctgct
ggaaatgatgacatcattggaaccatgattgctgatgctattgacaaggttggacccgac
ggtgtcttgtctatcgagtcatcatcctcttttgagacaactgttgatgttgaagaaggg
atggagattgatagaggatacgtctccccacaacttgttaccaacccagagaaactactg
gttgaatttgagaacgcgagggttcttgttacagaccagaagatatcttctataaaggaa
ataatttcaatattggaacagacaactcaattgagagcccctttgctgattattgctgag
gatataacgggtgaggctttggctacacttgttgtgaacaagctgcgtggtattattaac
gttgcagccattaaagcacctggttttggtgagaggagaaaggctttacttcaagatatt
gccattgtgacaggggccgagtatctagccagtgatttgggtttgctggttgagaacgcc
accgtggagcaactcggtaccgcgaggaagatcacagtcagcaaagattctacaaccatc
attgctgacgcagcaacaaaggacgagatacaatccagaattgctcagataaaaaaggaa
ttatacgaaacagattccgtgtacgacactgagaaattatcagaaagaatcgccaaattg
tcgggtggaattgcggttattaaagttggtgctgcaaccgaaaccgaattagaagaccgc
aagctacgtattgaagatgctaaaaacgcgacgtttgctgccattgaagaaggtatagtt
cctggtggcggtgctgcgtttgttcatctttcaacacttgttcctgccatcaaggacaca
cttgaggatgctgatgagcggttaggtgctgacattattcaaaaggcactggtggcaccg
gctgctctgatagctcaaaatgcgggagttgaaggtgaggtggtggtggagaaggttaag
gagagtgaatgggatatgggttataatgcaatgaccgataagtatgagaatttggtggag
tctggagttattgatcccgcaaaggtgactagatgcggtttgcaaaacgcggcttcagtc
gcgggaatggttctaaccacacaagccatcgtggttgaaaagcctaagccaaaagcgcct
gtagctgctgcaccacaaggtcttactgtatga
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