Bidens hawaiensis: 143567335
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Entry
143567335 CDS
T11418
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143567335
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
143567335
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
143567335
NCBI-ProteinID:
XP_076909899
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All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MKNQNMKICISGIMLTIFVLVCFMQHEGVDAAREMQHRRGSRVMKETFYPAYGETIPSSL
QYRKTSTIFNVLAFGAKGDGTTDDTKAFEAAWLAACKLEASTMVLPKGSVFLVKPISFAG
PDCESNIVFQLDGKIIAPKRSGSWESGLLQWLEFTKLNGITIRGTGVIDGQGSGWWSESG
TKPTAVRFYGSSDVTVTGITIQNSQQTHLKFDNCQSVQVFDITISSPGDSPNTDGIHLQN
SQDVTIHSTKLACGDDCVSIQTGSSGVNIQNVDCGPGHGISIGSLGKDNTRVCVSNITVR
DTKIHDTMTGVRIKTWQGGSGSVQGVTFSNIQVSEVETPIIIDQYYCDGGNCQNESSAVS
VSDISYQNIRGTYTRNPIRFACSDSSPCDVNLDTIQLQPVHKNDDMGKPFCLNAYGELKT
STNPPIDCLMAVKPSKKQSQYSYDSCKD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccaaaatatgaagatttgcatatctggcatcatgttgacaatatttgtgctt
gtgtgctttatgcaacatgaaggtgtcgatgctgccagagaaatgcaacaccggcgtggc
tcgagggtgatgaaagagacgttttacccggcatatggtgagactatcccgagttcgtta
cagtacaggaaaacctctaccatcttcaatgtattagcttttggtgcaaaaggcgatgga
acaaccgacgacacaaaggcatttgaagcagcatggctagctgcttgtaaactggaggca
tcaactatggttttgccaaaaggttcagtctttttagtcaaacccatatcattcgcagga
cccgattgcgaatcaaacatcgtttttcagttagatgggaagatcatagctcctaaaaga
tctggaagttgggagtcaggactccttcaatggcttgagttcacaaagctaaatgggata
acgattcgtggaactggtgttattgacgggcaaggctcaggatggtggagcgagtcgggc
actaaaccaacagcggtcagattttacgggagttcagatgtgacggtcacaggcataaca
attcaaaacagtcaacaaacacacctcaagttcgataactgccaatctgttcaggttttc
gatatcactatttcgtccccgggtgacagcccaaatacagacggaattcacttgcaaaac
tctcaagatgtaaccatccatagcaccaaacttgcgtgcggagatgattgcgtttctata
caaacaggatcttcgggtgtaaacatacaaaatgtggattgtggaccgggacatggaata
agcatcgggagcctaggcaaagataacacgagagtgtgtgtttcgaatataacagtacgc
gacactaagatccatgacacaatgactggagttagaataaagacctggcagggtggttcg
ggctcagtgcaaggcgtgacattttccaacattcaagtttcagaagtcgaaactccaatc
ataatcgatcaatactactgcgatgggggcaactgccaaaacgaatcatcagcagtgtct
gtttccgacatatcttaccagaacataagagggacgtatactagaaatcctattcggttc
gcatgcagcgatagctcgccatgtgatgtaaatctagacacaattcaactacaaccagta
cacaaaaatgacgatatgggcaaaccgttttgtttgaatgcctatggagaactcaaaaca
agcactaaccctccaatagattgcttgatggcagttaagccatccaaaaaacaatctcaa
tatagctatgattcatgcaaagattga
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