Bidens hawaiensis: 143569224
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Entry
143569224 CDS
T11418
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like isoform X1
KO
K07466
replication factor A1
Organism
bhw Bidens hawaiensis
Pathway
bhw03030
DNA replication
bhw03420
Nucleotide excision repair
bhw03430
Mismatch repair
bhw03440
Homologous recombination
bhw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143569224
03420 Nucleotide excision repair
143569224
03430 Mismatch repair
143569224
03440 Homologous recombination
143569224
03460 Fanconi anemia pathway
143569224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhw03000
]
143569224
03032 DNA replication proteins [BR:
bhw03032
]
143569224
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143569224
Transcription factors [BR:
bhw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
143569224
DNA replication proteins [BR:
bhw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
143569224
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
143569224
MMR (mismatch excision repair)
143569224
DSBR (double strand breaks repair)
HR (homologous recombination)
143569224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143569224
NCBI-ProteinID:
XP_076911306
LinkDB
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Position
Unknown
AA seq
525 aa
AA seq
DB search
MLLFLYYSMSTSTHTSVPRQIYPLARLNPYQGNWTIKVRVTSKGHMRHYNNTRGEGCVFS
VELTDDDGTQIQAIMFNAAARKFFELFDMGKVYYISGGYLKRANKQYNRVDNDYEMTLNE
NSQVEEAVNEPIIIPTLTFSFVPIDQLGPYVQQKELIDVIGVVQHVSSTMSIRRKADNES
VPKRDITIADDTMKSMIVSLWGPLATGIGSKLLDMFDASPIVAIKSLRVSDFGGLTLSTI
TKTIIEINPNSHESQKLKTWYASEGSVATFESVGSTFRPGHTNDAPSMYSDRVGLEYITN
NPSLGESTVIASDNLSPKVSQVTTMSSNIIPTLTYYVSLTMTFVLQPVYYTTRACMSFIK
DDQAMYYRTCKTCNKKLTVNVGSAYSFLICRKTQTDPNFRCVKLRRLLLVAMTSIFNWFT
SRYVVSAKFSDASGEAWMSLFADEAETIIGCSAADLDIMKSKPDGSAYQTQLKKAKWVPH
VFRVMVALRAYNNDRRQRITVKIVSLVDYAGESKYLLNEISSTQS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttgttatttctttattacagcatgtcaacatcaacacatacgtctgtaccaaggcag
atttaccccctcgctcgcttgaacccgtatcaaggaaactggaccattaaagtccgtgtc
acgtctaaagggcacatgcgtcactacaacaatacaagaggtgaaggctgcgtttttagt
gtggagctaaccgatgacgatggtactcaaattcaagcaatcatgttcaacgcagctgca
aggaagttttttgaactctttgacatgggcaaagtttactacatatcgggcggatactta
aaaagggctaacaaacaatacaatcgtgtagacaatgattatgagatgaccttgaatgaa
aattcccaagtggaggaggcagttaacgaaccaattattatccctacactgacgttcagc
ttcgtcccaattgatcaactaggaccatatgtacaacaaaaagaactaattgatgttatt
ggtgtcgtacagcatgtatcatcaacaatgagcattcggcggaaagctgataacgaatcc
gttccaaaacgtgacataactatagccgatgacacgatgaagtcaatgattgtatctttg
tgggggccccttgccaccggtattggtagcaaactacttgacatgtttgacgcctcacca
attgttgcaatcaaatcgttaagagtatctgattttggaggtttaacattgtcgacaatc
accaaaaccatcatcgagataaacccgaacagccatgagtcacagaaactaaaaacctgg
tatgcttcagaaggaagtgtcgcgacctttgaatctgttgggtccactttcagacctggg
catacaaatgatgccccatcaatgtactctgatcgcgtgggacttgagtatataaccaac
aatccgtctttgggtgaatcaacggtaatagcttccgacaacctatcacctaaagtgtca
caagtgacaacaatgtcatccaacatcataccaactttgacttattatgttagcctaaca
atgacatttgtcttgcagcctgtatattacactacacgtgcatgtatgagtttcatcaag
gatgaccaagccatgtattatcgcacttgcaaaacttgcaacaagaaacttaccgtcaat
gttggttctgcttactcatttttaatttgcagaaaaacacaaaccgaccctaacttcagg
tgtgtgaaactacgacgattactactcgtggccatgacgtccatatttaattggtttaca
tccaggtatgttgtgtcagccaagttctcagacgccagtggtgaagcttggatgtctctt
tttgctgacgaggcagaaaccattataggctgctctgctgctgaccttgatatcatgaaa
tcaaagcctgatggaagtgcctatcaaacacaacttaagaaagcaaaatgggtcccacac
gttttccgtgtcatggttgcactacgtgcctacaataatgacagaagacaaaggattact
gtgaagattgtcagtttggtggattatgcaggtgaatctaagtacctgctgaatgaaata
tcttcaacgcaatcttga
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