Bidens hawaiensis: 143569296
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Entry
143569296 CDS
T11418
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
bhw Bidens hawaiensis
Pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143569296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143569296
Spliceosome [BR:
bhw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
143569296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
143569296
NCBI-ProteinID:
XP_076911366
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MEIPIKPIDQLLERVLCMNILSSDYFKELYRFKTYHEVIDEIYNQVDHVEPWMTGNCRGP
STAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAAEPKTLWGWFEPYVKDD
EEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRSITSNLEKLKLPTKHCGVT
GESTRGSDDMARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPLPSYDRKDGDDSK
RSPSRHRSQSRDLSDRDYTDRDRRDRDRDHGRDRDRDHGRDRDRDRDRYRDRRHDYDRRY
RETSRRDYHRESSSRRSRSRSRSRSRSRSQSVRVDYKPSPNREETKDRTSASSNLAKLKD
MYGDLSTEKGGGPSGGGAIGRDNNGGEEVIRLGGSSWR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagatacctattaagccaattgatcaacttttggagagggttctatgcatgaatatc
ctttcatcggattactttaaagagctttatcgtttcaagacttatcatgaagtgattgat
gagatatataatcaagtggatcatgtggagccatggatgactgggaattgtcgtgggcct
tcaactgctttttgtcttttgtacaagttcttcaccatgaaacttactgtgaagcaaatg
catggcctgttgaagcacccggattctccatacataagagcggttggatttttatactta
agatatgctgcagaacctaaaactctgtggggctggtttgaaccttatgttaaggatgat
gaggagttctcgcctggatctaatggaaggatgacaacaatgggcgtatatgtgcgggac
ttacttcttggccagtactactttgatacactctttcctcgcattcccgtccccgtaatg
cggtcgataacatcaaaccttgaaaaactcaaactcccaaccaaacattgtggagtaacc
ggggaatccacccgtggatctgatgacatggcccgtcgaccgccatctgtcaaagcagca
ctttcagtttctttcggtcagcgggcccctcaccgtgcatccactcgagactcctcgcct
gttcgccgcactctcccaccactcccttcctatgaccggaaagacggcgatgattccaaa
agatccccttcccgccaccgtagccaaagccgtgatttgtccgatcgggattacaccgac
cgagatagacgggaccgggaccgagaccacggacgggacagggaccgagaccatggacgg
gacagagacagagatagagacagatatagagacaggagacatgattatgatcgcaggtac
agggaaacaagccgtagagactaccacagggaatctagttctcgaagaagccgaagcagg
agccggagtcggagccgaagccgaagccagagcgtgcgcgtggattataaaccgagtcca
aaccgagaagaaacaaaagacagaacatctgcatctagtaacttggctaagcttaaagac
atgtatggtgacttgtctactgaaaagggtggcggtccaagcggtggtggtgctattggt
agggataataatggtggtgaagaggtcattcggctcggtggttcttcttggaggtaa
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