Bidens hawaiensis: 143570290
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Entry
143570290 CDS
T11418
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bhw Bidens hawaiensis
Pathway
bhw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
143570290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143570290
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
143570290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143570290
NCBI-ProteinID:
XP_076912089
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Position
Unknown
AA seq
1229 aa
AA seq
DB search
MDFSKTRLHQRTRSAYDNLYKEYNKKKKSNEKPLNSGGDGGSGSGGLVDENDGDRVTASV
SGDVSKDKSSRKFSKGLGGSNGGRNEVGSVSCRTRLALKKRGENLTQVQLIDELEDDEDD
VQNHVNSGIEEVSEEQMTEETLRRGRSRKRGKKASQNSSVDELDEDCGRKSSRTNDSQQN
SASVAAADDALSYPGDSCFGRNASNSENEPDTGLLNNATVSNGDCLKGKGNKDTKDSSLS
SRGFALSPGLESGESDDDDDAGVTCLGDDFACLEEYDPSHSSRVESNEVKVSPVELDSVQ
ADADADADADADVDAGLKSSEQEEDDPQKAVSPEENNAVAEDKEVICLSSGDSEDGEKDD
YEPHIFNPKPFYMSKSKTKKVDFFVPVVGEKHKRYDKPVEGDSKKRRTDADSSLGFGRNN
NKTDEDTCWQWEAVEEKGPSKADKFTSKTFDQFGGKVNAVEILKDAMMHEGDGDNVFKRY
VDIFTEDIPEENTQVVQVQSYKFKFEDEEDTKPDKSECEIEMDELFDEMNMCLQLSEIGS
DISMVSRGDADFLVDGADQATCCHHGKHELTINDEFGMICRYCPYVEMEIRDILPPLSKN
GRGGHGRHDHDHDHDKTDNMKFSDLKLADCNQDRHHDSNMNEFEKGTVWDLVPGVKESMY
PHQRDGFEFIWQKIAGGIYIDKLEKRLPTGGSGCIISHAPGTGKSRLTIVFLQAFLKMYP
SSRPLIVAPRSMLLTWEEEFKKWNTEFPFFNLNNTECSGQEYKKAATFLKKFGGIKSLSG
SRCLKLYSWKKIPSILGITYRLFESLAGEEGKRKRSSKNDEDELVKDLLLKVPTLLVLDE
GHTPRNDQSLMWKTLLTVKTKRSIILSGTPFQNNFDELYNTLCLVNPLLFFGGSSFNGVK
VTKKRGWKHNAAKGQWDSITSSVKKSQQKLQELRAMIDPFVHVHKGTILQERLLGLRDAL
VVLKPTRTQNSLMLKMGGSKASLSTDCLMSSISVHPSLLSPDSPICTEGFHKMLNNFKND
PKAGVKTEFLIELIKLCDAHNEKVLVFSQYLKPLEFIMELLNANFRWVEGRECLYMDGKQ
EEKQRQSSINTLNDPKSEAKVLLASLRACSEGINLVGASRVVLLDVHWNPSVERQAISRA
YRLGQKKLVHVYHLVTGSMEGEKYIRQVEKSHLSELVFSSKNNNSSNKVSSTVIKDKILE
EMVQHDKLRNMFEKVIYQPKEADLIDTFG
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcgaagacgaggttgcatcagcggacgcgttctgcttacgataacctttac
aaagagtacaataagaagaagaagagtaacgagaaaccgctgaatagcggcggtgacggc
ggaagtggcagtggtggtttggttgatgagaatgatggagatcgtgtcacggctagtgtt
agtggagatgtttctaaggataagagttctagaaaattcagtaagggtttagggggaagt
aatggcggtaggaatgaagttggatctgtgtcgtgtagaacgaggcttgcgcttaaaaag
aggggtgagaatttgacgcaagttcagttaattgatgaattggaggatgatgaagatgat
gtgcagaatcatgtgaattctggaattgaagaggtttctgaagagcaaatgaccgaggag
acattacgaaggggtcgatctcgtaaaagaggtaaaaaagcaagccaaaatagttctgta
gatgaattagatgaagattgtggccgcaagagttccagaacaaatgattctcagcaaaac
agtgcttctgttgctgctgctgatgatgctctttcatatccaggtgatagctgctttggg
agaaatgccagtaactccgaaaatgaaccggatacagggctattgaataatgctactgtt
tcaaacggtgattgtttgaaagggaaggggaataaagatactaaagatagcagtttaagt
tcacgtggttttgcactttcacctggtttggaatctggtgaaagtgatgatgatgatgat
gcaggtgtaacctgcttgggtgatgattttgcgtgtttagaagaatatgatccttcacat
agctctcgtgtggaaagcaatgaggtaaaggtcagtccagtggagctggactcagttcaa
gcagatgcagatgcagatgcagatgcagatgcagatgttgatgcggggctaaagtcatct
gaacaggaagaagatgatccacagaaggcggtgtcacctgaagagaataatgctgttgca
gaagataaggaggttatttgtttgagttctggtgacagtgaggatggtgaaaaagatgac
tatgaacctcatattttcaatccaaaacctttttacatgtctaaaagcaagaccaagaaa
gttgacttttttgtgcctgtagttggtgaaaagcataagcgctatgataaacctgtcgag
ggggattcgaaaaagaggcggaccgatgcagattcttcacttggttttggtagaaataat
aacaaaactgatgaggatacttgttggcaatgggaagcagttgaagaaaagggcccgtca
aaggctgataagttcacaagtaaaacctttgatcaatttggaggtaaagtcaatgctgtg
gagattctcaaagatgcaatgatgcatgaaggggacggtgataacgtgtttaaaaggtat
gttgacatttttacagaagacatacctgaagaaaatactcaggttgttcaagtacagtcg
tataagtttaagtttgaagatgaggaggatacaaagccagataaatcagaatgtgagata
gaaatggatgagctttttgatgagatgaacatgtgcttacagctatcagaaattggttct
gacatctctatggttagccgtggtgatgctgacttcttggtggatggagcagatcaagct
acttgttgtcaccatggaaaacatgaactaaccattaatgacgagtttggtatgatttgt
agatattgtccgtatgttgagatggaaattagagatattttaccacctttgagtaagaac
ggaaggggtggacatggcaggcatgatcatgaccatgaccatgacaaaacagacaacatg
aagttttctgatctaaagttggctgactgcaatcaagaccgccatcatgattctaacatg
aatgaatttgagaaaggaacggtttgggacttggttcctggtgttaaagaatctatgtat
ccacaccagcgtgatggttttgagttcatttggcagaaaatagctggcgggatctacatt
gataagctagaaaaacgtcttcctactggcggaagtggatgcataatctctcacgctccc
ggaactggtaaaagccgtctgacaatcgtttttcttcaggcgtttttgaaaatgtatccg
agttctagaccgttaattgttgctcctcgttctatgcttcttacatgggaagaagagttt
aaaaaatggaacactgaattcccgttttttaatttaaacaacactgagtgttctggtcaa
gaatataaaaaagctgccacttttttaaaaaaattcggaggcatcaaaagcctgagcggg
agccgttgcctaaagttatattcatggaagaaaataccgagcattttgggaatcacttat
aggttgtttgaaagccttgctggtgaagaaggaaaacgtaaacgatcttcaaagaatgat
gaagatgagcttgtgaaagaccttcttcttaaagtcccgactcttttagtacttgatgaa
ggtcataccccccgtaatgaccaaagtcttatgtggaagacgcttcttaccgtcaaaacc
aaaagaagcatcattttatcaggaacgccgtttcagaacaactttgacgagttatacaac
actttatgtcttgtgaacccattgttattttttggcggttcgtcatttaacggtgtgaaa
gttactaaaaaacgtggatggaagcacaatgcagcaaaaggtcaatgggattctatcacg
agttcggttaaaaaaagtcaacaaaagttacaagaacttagagccatgattgacccattt
gttcatgtccataaaggtacgattcttcaagaacgactcctggggttaagggatgctttg
gttgttttaaagcccaccagaacacaaaactcacttatgttaaaaatgggcgggtcaaaa
gcgagtttgagcaccgactgtttaatgtcgtcaatatccgtccatccttcacttctttcc
ccggactctcctatatgtacagaagggtttcataaaatgcttaataacttcaaaaacgat
ccgaaagctggagtgaagaccgagtttttgatcgaacttattaagctatgtgatgcacat
aatgaaaaggtattggttttcagtcagtatcttaagcctttagagtttataatggaactt
ttgaacgccaattttcgatgggtcgaaggcagagagtgtttgtatatggacggtaaacaa
gaggagaaacaaaggcaaagttcaattaacacacttaacgatcccaaaagtgaagcgaaa
gtgcttcttgcatcacttagggcttgttctgaggggatcaatttggtgggtgcttcacgg
gttgtgttgcttgatgtgcattggaacccttccgtcgaacgacaggctataagtcgggct
tataggcttggtcaaaagaaactggttcatgtttaccatcttgttaccgggtcaatggaa
ggcgagaagtatataagacaagttgaaaagagtcatttgtccgaattggttttttcttca
aaaaataataatagttccaataaagtatcatctactgttataaaagataagattttggaa
gaaatggtgcaacatgacaagctgcgaaacatgtttgagaaggtgatttaccaaccgaaa
gaagcggatctgattgacacattcggttaa
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