Bidens hawaiensis: 143570412
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Entry
143570412 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143570412
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
bhw Bidens hawaiensis
Pathway
bhw03013
Nucleocytoplasmic transport
bhw03015
mRNA surveillance pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143570412
09122 Translation
03013 Nucleocytoplasmic transport
143570412
03015 mRNA surveillance pathway
143570412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143570412
03041 Spliceosome [BR:
bhw03041
]
143570412
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143570412
Spliceosome [BR:
bhw03041
]
Complex C
Other components
EJC/TREX
143570412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
143570412
NCBI-ProteinID:
XP_076912186
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MGEKSDSKKASSPYVVLENRPLDQWKVTELKEELKKRKLMTKGLKEELVKRLDEAVRAEM
DEVNKNLEDDLNNEAQPEVQYDDTEKTTDVTDDTEGKTETLEKNNTVEDTVHTDDGMQSL
TEKTVTEGESGIGSTQVEAVQVVKEVTVETTVMVTEVSTGDLNQLPRSSEQESAEPDSSD
LIGGKQVDEVSKTQSDSISIDTVSITEKNELKDNVIADNVKLEIDDKPTNMILDDSKSES
VEAAEEKDVNKVESKDFSNEKDNVIATDVNLGLDAKFENDPLKEKVNDAENVDIIKKNDS
GDVGSSEKLNLDRSSGDDSMEDDALESKQIDSKFSSEEVGNKSEKIEVKEDISVDVMVED
APADKDFVTVDDKTRLNVTSTKRKPLDQEKTVENNETIKRQRRWNSENLTSPKLTTNHSA
STTPKDAFQNPAKHAFSRSESTKSLDSPKERVVPPSSKTPTTSLRIDNFLRPFTLKAVQE
FLGKTGTVVSFWMDQIKTHCYITYASVEEAIETRNAVCNLQWPVNGGRLLMADFVDPQEV
KNRVDPPPPSPATTLPPPATTIPTPTATIQLPQPSPRLKQQLPPPPTLPPPPPLSNPPAA
RNRAAPPLEKIDPPIVTLDDLFKKTRATPRIYYLPLSDEQVAAKLKAQGKPGNH
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaaatcagatagcaaaaaagcatcttcaccgtatgttgtccttgaaaaccga
ccccttgaccaatggaaagttaccgagctgaaagaggaacttaagaaacggaagttaatg
acaaaggggttgaaagaagaacttgttaaacggttggatgaagctgtacgggctgaaatg
gatgaagttaataaaaatcttgaagatgacttgaacaacgaggcccaacctgaggttcaa
tatgatgacacagagaagactacagatgtcactgatgacaccgagggcaaaactgagact
ttagagaaaaataatactgtagaggatacagttcatacagatgatggtatgcagtcatta
actgaaaaaacggttacagaaggtgaaagtggtattggttctactcaagtggaagctgtt
caggtggttaaagaggttacagttgaaaccactgttatggtaactgaagtgtctactggt
gatttgaaccagctgccaaggtcttctgaacaagaaagtgccgagcctgattcatcagat
ctcatcggtggcaaacaggtagatgaggtcagcaaaacacaatctgattctatttctatt
gatactgtctcaattactgaaaagaatgaactaaaggataatgtaattgctgataatgtt
aaattagaaatagatgataagcctaccaacatgatcctagatgatagcaaatctgaatca
gttgaagccgctgaagagaaagatgtcaacaaagttgaaagtaaagatttttctaatgaa
aaagataatgtaatcgctactgatgtcaatttagggttagatgccaagtttgagaatgat
ccactcaaggaaaaggttaacgatgctgaaaatgttgatattattaagaaaaatgatagt
ggggatgtgggttcttctgaaaagttaaatttggatagaagttctggtgatgattcaatg
gaagatgatgctttagaaagcaagcaaattgattcaaagtttagttctgaagaagtggga
aataaaagtgagaaaattgaagtgaaggaagatatttctgttgatgttatggttgaagat
gcccctgctgacaaggattttgtcacggttgatgataaaactcgtcttaatgtgacatcc
actaaaagaaagcctcttgaccaggaaaaaacagttgagaacaatgaaacaataaaaagg
cagcgtaggtggaactctgaaaaccttacatcacccaaactaaccactaatcactctgct
tctactacaccaaaagatgcatttcagaacccagccaagcacgccttttcaagatccgag
tctacaaaaagtctagattcgcccaaggaacgagtcgtcccgccttcttcaaagactcca
actacttctcttagaattgataattttctgcgcccattcactttaaaggctgtgcaagag
tttcttggtaaaacgggtacagttgttagcttctggatggatcagatcaaaactcattgt
tatattacatatgcatcagtggaagaagctatagagacccgaaatgctgtatgcaacctc
caatggccagtgaacggtgggcgtcttctaatggctgattttgtggacccgcaagaagtt
aagaatcgggttgacccgcctccaccatctccagccacgaccctaccgccacctgccacc
actataccgacacctaccgccaccatccaactaccacagccctctcccagactgaagcaa
cagcttcctcctccacctacccttccacctccaccaccactgtctaacccaccagcagca
agaaaccgtgcagcaccaccactggagaagatcgatccaccaattgttacattggatgat
ctttttaagaaaacaagggccactcctcgtatctactacctaccgctttctgatgaacaa
gtggcagcaaaactgaaggctcaagggaaacctgggaatcactag
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