Bidens hawaiensis: 143570563
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Entry
143570563 CDS
T11418
Name
(RefSeq) single-strand DNA endonuclease 1-like
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143570563
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
143570563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
Lzipper-MIP1
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
143570563
NCBI-ProteinID:
XP_076912303
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MGVKNLWEILDSCKKTLPLHHLQNKRVCIDLSCWMVQLHNVSKSHCSIKDKLYLKGLFHR
LRALIALNCSLIFVTDGSIPGIKVSTYRRRLHLDNERTRDESSSNKNAPLQRNMGSEFSC
MIKEAKILGSALGVPCLDGIEEGEAQCALLDSESLCDGCFSSDSDIFLFGARTVYRDICL
GEGGHVVCYEMDDIEKNLGFGRNSLIALAVLLGCDYSPGVRGIGPDIACQIVRSYGESAV
LQRLASQELLLKKKAKCSNKQNQVPAFNNKENIPPHESNINVGHNSNLPSSNQFLQVMDA
YLKPKCLSADSQMVQRVLGIHSFQRTKLLQTCHRFFEWPPEKTDEYVLPKIAERDLRRFA
SLRCTSSNLGVQLPLDKVCFSYKEGSYLDLNVDDGNCSYTDWLIENASYYALASQNALMQ
QMLTMDNEIGSHNKFPKLLKLSDFARWEPRFNAHLGSVHPSSVRFLDEVYAAPLVGSDNL
GWTPKEFKHYEAQEIKDFESETKAYSTLTMALPEQIFYQYSTIKTCASLCATLKTRSLGN
TLESKKTLIEEREFDLKCHNSLKDNQNQNPSLYGGAMPANNSSSSVPITTFFTQAQEESA
NVNGSPSICFIETGANSGSNASASNSLPKEILRLRTYISNLENEVLELKNKLGKSRDSSF
LLNEIIEVYNSHKINGKAGLGYVEIPPPFKGDYCSIPDVKQCPEMPTVESEKC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaaaaaacctgtgggaaatcttagattcttgcaagaaaacacttcctcttcac
catctccaaaacaagagggtttgcatcgatctatcatgttggatggttcaacttcacaat
gtctcaaaatcccattgttctatcaaagataagctttacctcaagggtttatttcaccga
cttcgggccctcatcgccttgaattgcagccttatcttcgttacagatggctcaattccg
ggcatcaaagtatctacgtatagaaggcgtctgcatttggacaatgagagaacccgagac
gaatcttcttcaaataaaaatgctccccttcaaaggaatatgggctccgagttctcgtgt
atgataaaagaggccaagattcttggttcagcattaggggttccgtgtttagacggtatt
gaagaaggtgaagctcaatgtgcattattggactcggagtcgctatgtgatggatgtttc
tcttcagactcggatatctttctcttcggagcaagaacagtgtatagggacatatgcctt
ggggaaggtgggcatgttgtttgttatgaaatggatgacattgagaaaaaccttggattt
ggaagaaactcattgattgctctagctgttcttcttggctgtgattactcaccaggtgtt
cgtgggattggtccagatattgcgtgtcagattgttagatcttatggtgaatctgcagtt
cttcagagacttgcatcacaagaattgttgcttaaaaagaaagctaagtgttccaacaaa
cagaatcaagtacccgccttcaacaataaagagaacataccgcctcatgaatcaaatatt
aatgtagggcataatagtaatttaccaagtagtaatcagtttcttcaagtgatggatgca
tacctcaaaccgaaatgtctttcagctgactctcaaatggtccaaagggttcttggtata
cattcatttcaacggacaaagcttctgcaaacatgccatcggttttttgagtggcctccc
gagaaaacagacgagtatgttcttcctaagattgctgaaagagacttgagacgatttgca
agcctacggtgcacctcctctaacttaggagttcagcttcctttagacaaggtctgtttt
tcttataaggaagggtcatatttggatttgaatgttgatgacggtaattgtagctataca
gactggttaattgagaatgcttcatattatgcattggcatcccagaatgcgttaatgcaa
caaatgctgaccatggacaacgagatcggtagtcataacaagtttcctaaacttctgaag
ctgtcagattttgctcggtgggaaccgagatttaatgctcatttggggtcggtacatcct
agcagtgtacggtttctcgatgaagtttatgcggcacctcttgtaggtagtgataatctt
ggctggactccaaaagaatttaagcactatgaagcacaggaaatcaaagattttgaaagt
gagacaaaagcatattcgactctcacaatggctttgcccgagcaaatcttttatcagtat
agcactattaagacttgtgcatctctatgtgcaaccctgaagactagaagcttgggaaat
acgctcgagagtaagaagactcttatcgaggaaagagaatttgatttgaagtgccataac
tcattaaaggataatcaaaatcaaaatccttctttatatggtggtgcaatgcctgcaaat
aattcttcaagctcagttcctatcacaacattcttcactcaagcacaagaagagtcagca
aatgtaaatggttcacctagcatttgcttcatagaaactggggcaaattctggttcaaat
gcaagtgcttcaaattcgttgcctaaagagattctccgactccgaacctacatttcaaac
ctagaaaatgaagttttagaattgaaaaacaaacttggaaaatctcgtgattcctcgttt
cttttaaatgagattatagaagtttataattctcacaagataaatgggaaagcgggttta
gggtacgtcgagattcctcctccttttaaaggagattactgtagcattcctgatgtgaaa
caatgtccagaaatgcctactgttgaatctgaaaaatgttga
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