Bidens hawaiensis: 143571742
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Entry
143571742 CDS
T11418
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
bhw Bidens hawaiensis
Pathway
bhw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
143571742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143571742
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
143571742
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
143571742
NCBI-ProteinID:
XP_076913199
LinkDB
All DBs
Position
Unknown
AA seq
1196 aa
AA seq
DB search
MKRQQSILSFLRKRPQAPETDKPTGTGAPKHHTVTGPNENVNPRASSGPNRNYNNNIIII
QSSSYEIRGTDTPPEKEQRPLFSTKVNAEGGNDGGQSVFSSIRHKFMKPNSVEKLRDSNL
SDGRNDTIQLTSNKYSYSSGRDKESSAPVFPRKENGIDVEETVSKFSYSNERGKKTSVPV
FPKLEDVIDVEETVCKGNKGCPFVIESDGDIMGPETPGTQRLAPRVKRVQEDSCNLGSTA
TASTITNFSMGNIKRETPGTQPFVSRKQPLVPRLKRVQEDGCNLGSTANAGTNLSMGSSK
RVKFSQDILAENKKDDVLSEVASKFDWLHPSKIRDANGRRPGNPLYDKRTLYIPPDVFTK
MSASQKQYWSVKSQYMDVLIFFKVGKFYELYELDAEIGHKELDWKITMSGVGKCRQVGIT
EHAIDDAIEKLLARMYKVGRVEQMETADQAKSRGGSSVIQRKLVQVLTPSTLIYGNIGPQ
AVHLLSLKEGTHDLAEGTTAYGFAFVDCASLQFWIGSVTDDASCAALGALLMQVSPAEVI
YDNQGLSKETQKALNKYSIMGSSVTQLTPAQPFTDFVDSSEVRNFYQLKGYFRSSSNVWD
RALDEVAHQDIALCALGGLTSHLSRLKLDDALQNGSLFPYEVYRGCLRMDGQTMANLEIF
SNSEDGGPSGTLYKYLDNCLTLSGKGLLRRWICHPLKDAEEINNRLNVVEELMGRAEIVA
VTAQYLKKVPHLERFLGQIKATLKSSALLLLPLIGSKILKQRVKAFGSLVKGLRVGMDLL
MLLQKEDNVFSLFLKVFTLPMLSGTDGLDKFLTKFEAAVDGDFPNYQAHELKDSDAEILS
IFIELLMEKANEWSQIIFALSCIDVLRSFAMIANFSCMPMSRPVIVSRSNSSGFGQRSTG
PTLHMRGLWHPYALGESGGTPVPNDLCLGDNEFGYSPRTLLLTGPNMGGKSTLLRATCLA
VILAQLGCYVPCDTCVLSPADIIFTRLGATDRIMTGESTFLIECTETASVLQNATQDSLV
ILDELGRGTSTFDGYAIAYAVFCHLVDKVNCRLLFATHYHPLTKEFATHPHVTLQHMACT
FKPISNTSSSPDQELVFLYRLTAGACPKSYGMQVALMAGIPKTVVESAAKAAEVMKTKIG
VSFKSSEQRSEFSTLHEDWLKTILSVADGDGVSDEDDVYDTLFCLWHELRCSKEKL
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcaacaatctatactctcgttcctccgtaaacgtccacaggcacctgaaact
gacaaacctaccggaaccggagctccgaaacaccacacagtaaccggtcctaacgaaaac
gttaaccctagagcttcatccggacctaatcggaattataataataatattattattatt
cagtcctcctcctatgaaattagaggaacggatactccgccagagaaagagcagcggccg
ttgttttcgacgaaggtgaatgctgaaggtggaaatgatggaggacagtctgtgttttct
agtattcggcataagtttatgaaacctaatagcgttgagaagcttcgagatagcaatttg
tcagatggcagaaatgatactattcagttgacatctaacaaatatagttactcaagcgga
agagataaagagagttcagctccagtttttccaagaaaggaaaatggtattgatgtagaa
gaaactgtttccaaattcagttactcaaatgaaagaggtaagaagacttcagttcctgtt
tttccaaaattggaagatgttattgatgtggaagaaactgtttgtaaagggaataaagga
tgtcctttcgttatagaaagtgatggcgatattatgggaccggaaacaccaggaacacaa
cgactggccccacgtgtgaagcgagttcaagaagatagttgtaacttagggtctactgct
actgctagtacgattactaatttctctatgggaaatattaaaagagaaacaccaggaaca
caaccatttgtctcacgaaaacaaccattggttccacgtttgaagcgagttcaagaagat
ggttgtaacttagggtctacggctaatgccgggactaatttgtctatgggaagtagcaaa
agagtgaagttttctcaggatatactggctgaaaataagaaagatgatgtgttgtctgaa
gtggctagtaagtttgattggcttcatccttctaagattagagatgctaatggaagaagg
ccaggcaatcctctttatgataagagaacactttatataccgcctgatgttttcacgaag
atgtcagcatctcagaaacagtattggagtgtcaaaagtcagtacatggatgtccttatt
ttcttcaaagtgggaaaattctatgagctttatgaactagatgctgaaattgggcataaa
gagctagattggaaaataacaatgagtggtgttggaaaatgccgacaggttggtatcacc
gagcacgcaattgacgatgctattgaaaagcttcttgctcgcatgtataaagttgggcga
gttgagcagatggaaacagcagatcaagcaaaatcaagaggaggttcttctgtaattcaa
agaaaactagtacaggtgcttacaccatcaactttgatttatggtaatattgggccacaa
gctgttcatcttctttctctaaaggagggtacacatgatcttgctgagggtacaactgca
tatggatttgcatttgttgactgtgcctccttacagttctggattggatctgtcactgat
gatgcttcctgtgcagctttaggggctcttttgatgcaggtgtcaccagcagaagttatt
tatgataatcaagggttgtctaaagagactcagaaagcccttaacaagtattcaattatg
ggttcttctgtcacacaattgactccagcacaacctttcactgattttgttgattcttct
gaagttagaaatttttatcaactgaaagggtactttagaagttcctccaatgtgtgggat
cgtgcacttgatgaagtggctcaccaggatattgcattatgtgctcttggtggacttacc
agtcatttatctaggctaaagttagatgatgcattacaaaacggaagtcttttcccctat
gaagtctacagaggatgccttagaatggacggtcaaacaatggctaatcttgaaatattt
agcaatagtgaagatggtggaccatcaggaacactgtacaaatatcttgataactgtttg
acattatccggtaaaggactcttacggaggtggatatgccatccactgaaagatgcagag
gaaattaataataggcttaatgtggttgaagaattgatgggacgtgccgagatagtggcg
gttactgctcagtatcttaaaaaggttccacatttagagagatttcttggacaaattaaa
gctactttaaagtcatctgctttactcttattgcctttgattggcagcaaaatattgaag
caacgagtgaaagcatttggatctcttgttaaaggtcttcgagttggaatggatttattg
atgcttttacaaaaagaagataatgtattctcactatttttaaaagtattcacacttcca
atgctaagtgggactgatggcctcgataaattcctaaccaaatttgaagcagctgtagac
ggtgattttcctaattatcaggcacatgaactcaaagactcggatgctgaaatactatca
atttttattgaactattaatggagaaagctaacgagtggtctcaaatcatctttgcttta
agctgtattgatgtgcttagatcttttgccatgattgcaaatttctcatgcatgcccatg
tctaggcctgtgatagtttcaagatcaaactcatcgggttttggtcaacggtcaacgggg
cccacacttcatatgagaggattatggcatccttatgctcttggagagagtggaggaaca
cctgttccaaatgacttgtgtcttggagataatgagtttggatacagtcctcggactttg
ctgttgaccggaccaaacatgggcggaaagtcaactcttcttcgtgctacttgtttagct
gttattcttgctcagttgggctgttatgttccttgtgacacgtgtgttttgtcacctgcg
gatattattttcacacgtctcggtgctactgatcgtataatgactggtgaaagtaccttc
ttgattgaatgtacagaaacagcatcggttttgcaaaacgcaactcaagattctcttgtt
atacttgatgagctgggccgaggaacgagcacttttgatggatatgctattgcttatgct
gtgttttgtcatctcgttgataaagtaaactgccgattactattcgcaacacattaccac
ccactcacaaaagaattcgcaacccacccacacgttacattacaacacatggcatgcaca
ttcaaacccatatccaacacttcgtcatcacccgaccaagagttagttttcctctaccgt
ctaactgcaggcgcctgcccaaaaagctatggtatgcaagtggcattaatggcaggaatc
cccaaaacagtggtggagtccgccgcgaaggccgcagaggttatgaaaacgaagattgga
gtgagttttaagtcgagtgaacaacggtcggagttttcgacattgcatgaggattggttg
aaaactattttaagcgttgcggatggtgatggagttagtgatgaagatgatgtgtatgat
acattgttttgtttgtggcatgagcttagatgctctaaggaaaagctgtga
DBGET
integrated database retrieval system
