Bidens hawaiensis: 143573027
Help
Entry
143573027 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143573027
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143573027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143573027
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143573027
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
143573027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
BAR_4
NTS
PDDEXK_4
DUF4407
Motif
Other DBs
NCBI-GeneID:
143573027
NCBI-ProteinID:
XP_076914133
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MGASRKLQIEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKYESDLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYDQALMDARKLIEKEMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNIVSELESQIDSFEAEMEGLSVKKGKARPPRLTHLESSITRHKA
HIMKLELILRLLDNDELSPEQVNDIKDFLDDYVERNQEDFDEFDDVDMLYITLPLDKVES
LEDLVTAVPPSLVKGVGATGGGLSIKSTFSTHSPAAVSPSAQHGDTVQEQADDAGPKNTS
IPSASPTSAGTNAIPVGSSSVKGVLDNSTFSSPINNAAKEEEIGRKPSPALPEAVLKNLG
KTGVTNTPSLTIPVTSSSTVSSSGPPLVSPLSSRMTLPPGGKTSDAGDGGGNGEVAGVTS
RVFSSPGAPGIQWRPGSSFQSTHEGVHRRPEIVPDQRENYLQRLQQVQQGQGTLLGMPTL
SGGNLKQFTTQQNPLLKPLNSQSSAASPQGVTSDQQKPSLIHSLSGQHTLMPTGSKDAEA
GHVKADESQQHQNVSDDSVTSSVLEKNPANEDDAKAPYTSDIQAGVPGSVAEADKVTKDV
DLSPGQPLQPGQIGSLGVIGRRSVSDLGAVGDGLSALSLNAGPTHDQQSILQLLESSFYK
LPQPKDSERAKTYVPRHPTVTPQSYPQVQAPIVSNPAFWERHGSDNVGTDTLFFAFYYQQ
NTYQQYLAAKELKKQSWRYHKKFNTWFQRHEEPKVATDDYEQGTYVYFDFQMGNDDMQNG
WCQRIKTEFKFEYSFLEDELVV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgggagccagtcgtaagcttcagattgaaatcgatcgagttttaaagaaggttcaggaa
ggcgtcgatgtcttcgatagcatctggaacaaagtttacgatacggagaatgcgaatcag
aaggagaagtatgagtcggatttgaagaaggagattaagaagctgcagaggtatagagat
cagattaagacgtggattcagtctagtgagatcaaggataagaaggttagtgcctcttat
gatcaggctctaatggatgcaaggaagcttatagagaaagaaatggagcggtttaagatc
tgtgaaaaggaaacaaagacaaaagcattctcaaaggaaggcctcggacagcagcctaaa
acagatccaaaagagaaagccaagtcagaaactagagattggctgaataatatagtgtct
gagctggaatcccaaattgatagttttgaagctgagatggaggggctgtctgttaaaaaa
gggaaagcaaggccaccaagattgactcatctagagtcatcaattactcggcacaaggct
cacataatgaagttagagttgatattgagactgctggataatgatgagttgagtcctgaa
caagttaatgatattaaggatttcttggacgactatgtggaacgaaatcaggaagatttt
gatgaatttgatgatgtggacatgctatacatcaccttaccattggacaaggtagagtca
cttgaagatctagtcaccgctgttccacctagtcttgttaagggtgttggtgctactggt
ggtggtctaagcataaaatctacattttcaactcattctccggccgcagtttcaccttct
gctcaacacggtgatacagtacaggaacaagctgatgatgcgggtcctaaaaacacatca
attccatctgcttctccaacatcagcaggaactaatgcaatccctgtaggttcaagttct
gtgaagggcgttttggacaattctaccttttcatcaccaataaacaatgccgccaaagag
gaagagattggtcggaaaccatctccagcccttcctgaagcagtgttaaagaatcttggt
aaaactggtgtgaccaatacgccctcactcaccatcccagtcacctccagtagtacagtt
tctagcagcgggccgccgttggtttctcctttaagtagtagaatgacattgccaccaggt
ggcaagaccagtgatgccggtgatggtggtggtaatggtgaggtggcaggtgttacaagc
agggtgttttcatctcccggagctcctggaatacaatggagaccgggaagttcctttcaa
agtacacatgaaggggttcatagaagacctgaaattgtacccgatcaaagggagaattac
ttgcaacgtttacaacaggtgcaacagggccagggtaccctacttggcatgcccaccctt
tccggtgggaatcttaagcaatttactacacaacagaatccacttctgaaaccgctcaac
tcccaaagttcagctgcatcacctcaaggtgtcacatccgaccagcaaaaaccaagttta
atccattcactgtctggtcagcacacactcatgccaactggttcaaaagatgctgaagct
ggtcatgtgaaagctgatgagtctcaacaacatcaaaatgtatctgatgattctgtcaca
agttctgtgcttgaaaaaaatcctgccaacgaagatgatgcaaaggcgccatacacatca
gatattcaggctggagtacctggctcagtggctgaggcagataaagttacaaaagatgtc
gatctttctcctggtcaacctttacagcccggtcaaatcggtagcctcggggtcattggt
agaagaagcgtgtctgatcttggtgcggtcggtgacggcctcagtgccttaagtttaaac
gcgggacccactcatgaccagcagtccatcttgcagttgctggagtcttcgttctacaag
cttccacaacccaaggattctgagcgtgcaaagacttacgttccgaggcatcctactgtg
acccctcaaagctatccccaagtgcaagccccaattgttagcaatccagccttttgggaa
cgtcacgggtctgataacgttgggaccgatactctgtttttcgcattttactatcagcag
aacacgtatcaacaatatttagctgcaaaagaactgaagaaacaatcttggagataccat
aaaaagttcaacacatggtttcaacgacacgaagagcccaaggttgccactgatgattat
gaacaaggaacttatgtctacttcgattttcaaatgggcaacgatgacatgcaaaatggc
tggtgtcaaaggatcaaaacagaatttaaattcgagtacagttttcttgaagatgagctt
gttgtgtag
DBGET
integrated database retrieval system
