Bidens hawaiensis: 143574260
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Entry
143574260 CDS
T11418
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bhw01002
]
143574260
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
143574260
Peptidases and inhibitors [BR:
bhw01002
]
Serine peptidases
Family S54: Rhomboid family
143574260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
DUF6199
CcmH
DER1
EMC6_arch
Motif
Other DBs
NCBI-GeneID:
143574260
NCBI-ProteinID:
XP_076915036
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDESRQPDIRIKVNSRRGFGGGNIIHPVAVESSPAVNQSQTPSPLREVKHFKKWFPWLIP
SFVVADTALFIITMYVNDCPKNSVSCIATFLKRLSFQPFKENPLLGPTSSTLEKMGALDV
SKVMDDHQVWRLITCIWLHGGLFHLLANMLSLLVIGIRLEQEFGFIRIGLLYVISGFGGS
LMSALFLQSNISVGASGAVFGLLGAMLSELITNWSIYANKVSALLTLVIIIAINLAVGIL
PHVDNFAHLGGFASGFLLGFVFLMRPQFGWVSQRYAPAYATVGAKPKYKTYQRVLWLVSL
IVLVVGMIVGLVSLLRGVNLNDHCSWCHYMSCVPTSRWSCNTDPVSCMSEQTGNQYTLTC
SGSGRNGTYTLDNPNQSKIRGLCSQLCR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcccggcagccggatatccgtatcaaagtcaactctagacgcgggtttgga
ggcggaaacatcatccatccggttgcagtcgaatcatcgcctgcagtgaatcaaagtcaa
acaccatctccattgcgagaggttaagcattttaagaagtggttcccatggttgatccca
agttttgtggtagcagatactgcgttgtttataattactatgtatgtcaatgattgtcct
aaaaactcggtttcttgcatcgctaccttcttgaagagattgtcgtttcagccgtttaaa
gagaatccgcttctgggaccgacttcttcgacgctagaaaaaatgggggctttggatgtg
agtaaagtgatggatgatcaccaggtttggcgtttgattacgtgcatttggttgcacggt
ggactgttccatttattggcaaacatgttgagtcttttagttattggcattcgacttgag
caagagttcgggttcatacgcattgggttgctttacgtgatctcagggtttggtggcagt
ttaatgtctgcacttttccttcagtccaatatatcagtcggtgcttcgggtgcggttttt
gggttgttgggtgcaatgctttctgaacttataactaattggagtatatatgctaataag
gtgtcagcattattgactctggtgatcattattgctattaatctggctgttgggattctg
ccacatgtcgataattttgctcatcttggtgggttcgcttctggttttctcctcgggttc
gtgtttttgatgcgtccccaattcggatgggttagccaaagatacgcgcctgcttatgct
acagttggagctaaacctaaatacaagacgtatcaacgtgtcctttggctcgtttcactt
atcgttttggtggtcgggatgattgttgggcttgtttcgcttctgcgtggagtcaacttg
aatgatcattgttcttggtgtcattacatgagttgtgtacctacttcacggtggagttgc
aacacggatcctgtatcctgcatgtctgagcaaacgggtaatcagtatacgttaacgtgc
tctggtagtggtagaaacgggacctatacgttggacaacccaaaccagtctaagattcga
ggtctttgcagtcagctttgtcggtga
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