Bidens hawaiensis: 143574563
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Entry
143574563 CDS
T11418
Name
(RefSeq) protein DAMAGED DNA-BINDING 2-like isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
bhw Bidens hawaiensis
Pathway
bhw03420
Nucleotide excision repair
bhw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143574563
09124 Replication and repair
03420 Nucleotide excision repair
143574563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143574563
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143574563
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
143574563
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
143574563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD_LRWD1
WD40_RFWD3
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
143574563
NCBI-ProteinID:
XP_076915269
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MSTRARRTASFPKVVIERDTDTEESSDEEVEEEVENDVVESEEEEIIEDQKVKDNGGSDK
KGKTPITISLKKVCKVCKRTGHQAGFQGATYIDCPMKPCFLCKLPGHTTNTCPHRVAMEF
GVIPASRKRMHNPFDYVFERQVRHGVSSIKPAFVIPNEVNCAVIRYHSRRVTCLEFHPTN
NNLLLSGDKKGQLGVWDFGKVYEKTVYGNIHKALLNNMKFGPANDGTVYTASSDGTVSCT
DLETGLSTTLMDLNPNGWQGRNSWKMLYGMDLNAEKGLVLVADSFGFLHMVDARANSKIG
DPVLIHKKGTKVVGLHCNPLQPDFLLSCGNDHFARIWDMRRLEAESCLHELPHKRVVNSA
YFSPLSGSKIVTTSIDNRIRVWDSIFGNLDTPSREIVHSHDFNRHLTPFRAEWDPKDPSE
SLVVIGRYISENYNGAALHPIDFIDISTGQLVSEVMDPNITTISPVNKLHPRDDVLATGS
SRSLFIWRPMEKSQMVQEKEKSKILVCDRKNSKKFGDESDDDDDSGDGFSSKKGKNLKHK
KPNLVITPSKSSKKKKP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactcgagcaagacgaacggcgtcgtttccaaaggtagttattgagcgagacact
gacactgaggaaagctcagatgaagaagtagaagaagaggtggaaaacgatgtcgttgag
tctgaagaagaagaaataattgaggatcaaaaggttaaagataatggaggttccgataag
aaggggaaaacgcctattactataagtctgaagaaagtctgcaaggtttgtaagagaaca
ggtcatcaagctggttttcaaggagctacttacattgattgccctatgaagccatgtttt
ctctgcaaattgcctggtcatacaacaaatacttgtcctcaccgggtggctatggagttt
ggggtcattccagcttctcgtaaacgtatgcataaccctttcgattatgtattcgaacgc
caagttcgccatggagtttcttccataaaacctgcatttgtgatcccaaatgaagtgaat
tgtgcagtgattagataccatagcagacgcgtcacatgcttagaattccatccaactaat
aacaaccttcttctatcaggcgataagaaaggacaattaggagtttgggatttcggtaag
gtgtatgagaagactgtatatgggaacatacataaggccctactcaacaacatgaagttc
ggtccagcaaacgatggaacggtttatacagcatcttcagatggaactgttagttgcaca
gacttggaaacaggtttatcaactacattgatggatctcaatccaaacggatggcagggt
cgtaacagttggaaaatgctgtatggtatggacttgaatgcagagaaaggtcttgtgctt
gttgcagatagttttggattcttacacatggtggatgcacgtgccaattctaaaataggg
gatccggttttaattcataagaaaggaaccaaagttgttggattgcattgcaaccctctt
caacccgactttctattaagttgtggaaatgatcactttgctcggatttgggatatgagg
cgtttagaagctgagtcttgtcttcacgagcttcctcataaacgagttgttaattcggct
tatttttctcctttaagtggaagtaaaatagtgactacatcaattgataatcggattcgt
gtgtgggattctatttttggtaacttggataccccaagtcgagaaattgtgcacagtcat
gattttaataggcatttgactccgtttcgggctgagtgggacccgaaggatccgtcagag
tcccttgtggttattgggcgttatataagtgaaaactacaatggagctgctttgcatccc
attgactttattgacatcagcacgggtcaactagtatctgaggttatggacccaaacata
accacaattagtcccgtgaacaagttgcatccacgcgatgatgttttagcaaccggtagt
tcaaggtccttatttatttggaggccaatggaaaagtctcagatggtgcaagaaaaagaa
aaaagtaaaatcctggtctgcgatagaaaaaacagcaagaagtttggagatgaaagtgat
gacgatgatgattctggtgatggtttttcaagcaaaaaaggtaaaaatttgaagcacaaa
aagccgaatctggtaataacgccttctaagagcagcaagaagaagaaaccttaa
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integrated database retrieval system
