Bidens hawaiensis: 143574787
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Entry
143574787 CDS
T11418
Name
(RefSeq) protein SPA1-RELATED 2-like
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
bhw Bidens hawaiensis
Pathway
bhw04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
143574787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143574787
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
143574787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
DSE1_N
ANAPC4_WD40
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Pkinase
Beta-prop_DCAF12
WD40_like
WD40_RFWD3
ARM_TT21_N
Beta-prop_SCAP
Y4lR_2nd
Motif
Other DBs
NCBI-GeneID:
143574787
NCBI-ProteinID:
XP_076915437
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MDASVDNEANTVNVYDSKRFRTNESRFLTKHGRSSNTQEMVIPDGVNIQESTSTSTRCLD
DAGAIVEELTIRNCSSGDMETGLALSAKERIHGSHNTWHAFFPDKTHNSNKQVKVQNDTV
NVSRLEEKRPALCDTFVSPSVTRSRMLSQSGFSKYFAKNTLKGKGVISSRDQDHIKAGLV
DCNSAPDTSVHEGLSLREWLKSGQNKVDKSKSMCIFKQILDLVDSSHSRGEVLLSLRPSC
FKLTPLNQVLYMGSPNTNLENSRDNKKELEPDALVGGSQSLKRRKHGENGNSFCRWPQFA
VNSGVKDSGYGFNEENMSSSLHLSAASQMVSNVDSDALEEQWYACPEDSRCSTLASNVYS
LGVLLFELLGSFESARAHATAMLNLRQRILPPSYLSENPREAGFCLWLLHPEPSSRPTTR
EILQSDLISGIQQSSIKQLSSTISQEDTDSDLMLHFLVSLKEQRLKRATKLVEDIKCLES
DISEIESRRADNNNNTLTFQENHSVLTRNLKPSTFSSLSESRLINNISHLEHAYFSVRST
IENPDPNSIKEYGEHEVLRSRENNIVTKKTEADKKPLDRLGVFFNGLCKYARYSKFEVRG
ILRNGDFANSGNVICSLGFDRDEDYFATAGVSRKIKIYDYHALLKDSVDIHYRAVEMSNK
SKLSSICWNNYIRNYLASTDYDGAVNIWDAGTGEAISHHIEHERRAWSVDFSRVDPIKFA
SGSDDCSVKLWSINEKKSLTTIKTVANVCCVQFSPYSTHLLSFGSADYKTYCYDLRNVST
PMCILSDHGRAISYVKFLDYGTLVSASTDNTLKLWDLNKTEFGCLSTNSCILTFKGHTNE
KNFVGLSVADGYIACGSETNEVFAYYRSLPMPITSHKFGSIDPISSKETEHENNHFVSSV
CWRQKSDTVLAANSSGCLKLLQMV
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtcagtggataatgaagcgaacacggttaatgtttatgatagcaaacggttc
cggactaatgagagcaggttcttaacgaagcatggaagaagctcaaatacgcaggaaatg
gttatacctgatggtgttaatattcaggagagtacaagcacgagcactcgttgcttggat
gatgcaggggcgattgttgaagagttaactataagaaattgcagcagtggcgatatggag
accggtcttgctttaagcgcaaaagaaagaatacatggctcacataatacttggcacgcg
ttctttccggacaaaacgcataattcaaataaacaagttaaagttcaaaatgacacggtg
aacgtttcacggcttgaagagaagcgacctgctttatgcgatacgtttgtgtctcctagt
gtgactcgatcaaggatgctttctcagtcagggttttctaagtattttgcgaagaataca
ttgaagggtaagggtgttattagcagccgtgatcaggatcatataaaggccggattagta
gattgtaactcggctccggatacaagtgttcatgaaggtttgagtttgagagaatggtta
aaatctggtcagaacaaggtggataaatcaaagagtatgtgtatatttaagcagatatta
gatctggtcgattcgtctcattctcgtggtgaagttttgttatccttacgcccgtcatgc
ttcaagttgacgccactaaaccaagttttgtacatgggttcaccgaatactaatttggaa
aacagtagagataataagaaagaattggaacccgatgctttggttggtggcagccaaagc
ttaaagaggagaaagcatggggaaaacgggaactcgttttgtaggtggcctcagtttgca
gtaaattctggtgtcaaagattctgggtacggatttaacgaagagaatatgtccagcagc
ctgcatttgtctgctgcgtcccaaatggtgtctaacgttgatagtgatgcattggaagaa
cagtggtatgcctgtccggaggactctaggtgctccacactggcttcaaatgtctactcg
ttaggcgttcttctgtttgagctgctcgggtcttttgaatctgctagagcccatgctact
gctatgttgaaccttcgacagaggatccttcctcctagttacctgtcggagaatccgagg
gaagctggattctgtctttggctgcttcatcctgaaccgtcatcacgtccaacaactagg
gaaatcctacagtccgatcttataagcggaatacaacagtcatctataaaacagttatca
tcaaccatttctcaagaagacaccgattcagatttaatgttgcattttctcgtatctctg
aaagaacaaaggctgaaacgcgccacaaaattagttgaagatattaaatgccttgaatcc
gacatctcagagatcgagtcaagacgagcagataataataataatactttgacttttcaa
gaaaatcattcagtgttaacgagaaacctaaaaccatctacattttctagtctcagtgaa
tcgcggttaataaacaatataagtcatcttgaacacgcttacttttcggtgaggtccacc
atagagaatcctgaccctaatagtatcaaggaatatggagagcatgaagttttaagaagt
cgggaaaataatatcgtgacaaaaaagacggaagcggataaaaagccgttagaccggctt
ggcgtgttctttaacggtttgtgcaaatacgctcgttatagtaagtttgaagtccggggt
attttaaggaatggtgattttgctaattcgggaaacgttatatgctcacttggttttgac
cgagacgaggattattttgcaactgctggagtgtcgagaaagataaaaatatacgattat
catgctttgttaaaggattctgttgacattcactatcgagctgttgagatgtcaaacaag
tcaaaacttagttccatatgttggaataattatatcagaaattatctagcttcaacagac
tatgatggtgcggttaatatatgggatgctggaactggtgaagcgatttctcatcatatt
gagcatgaaagacgtgcatggtctgttgacttttctcgtgttgacccgataaagtttgcc
agtggaagtgatgattgttctgtgaaactatggagcatcaatgagaaaaagagcttaacc
acaatcaaaaccgttgcaaacgtctgttgtgtccaattttctccttactcgacacattta
ctctctttcgggtcagctgattataaaacttactgttacgatcttcgaaacgtttcaacg
cccatgtgtatattatctgaccatggcagagcgattagttacgtaaagtttttggattat
gggaccctcgtctctgcctcaaccgacaacacgttaaaactatgggatcttaataagaca
gaatttggttgcttatcaaccaacagttgcatcttaacctttaaaggtcatactaatgag
aagaattttgttggattatctgttgctgatggttacattgcttgtggttcagaaactaat
gaggtttttgcttattatagatcgttacctatgcctataacttcccacaagtttggatct
atagatcctatatcgagtaaggagaccgaacatgagaacaatcattttgtttcaagtgtt
tgttggaggcaaaaatccgacacggtgcttgcagccaactctagtggatgtttgaaactg
ttgcagatggtttaa
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