KEGG   Bidens hawaiensis: 143576103
Entry
143576103         CDS       T11418                                 
Name
(RefSeq) THO complex subunit 6-like
  KO
K13175  THO complex subunit 6
Organism
bhw  Bidens hawaiensis
Pathway
bhw03013  Nucleocytoplasmic transport
bhw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143576103
  09122 Translation
   03013 Nucleocytoplasmic transport
    143576103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhw03019]
    143576103
   03041 Spliceosome [BR:bhw03041]
    143576103
Messenger RNA biogenesis [BR:bhw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     143576103
Spliceosome [BR:bhw03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    143576103
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st WDR55 Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_EML_2 EIF3I WD40_Gbeta WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th DSE1_N Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_IP5PC_F Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 143576103
NCBI-ProteinID: XP_076916404
LinkDB
Position
Unknown
AA seq 435 aa
MVRNPNSGKIDNQESCKQIESFAITTITFHHFGTTVTSNDHHTNVATAEMGPDNCHHQKT
ITMSSEIETNKIINQGRNCLHDAYRDSILDDLESSSLTIFRTVFSPPSTTDDRNPNYIVA
ASSDGSIASYSLSSLISSVSPAVGSSRAQNLFVAEPDCLINGHDGPTYDVKFYGDAEDSL
LLSCGDDGRIRGWKWMDMFEAKHNGGLLKPQLDLANPQHKGPWGALSPIPETNAIAVDTQ
GGSICAAAGDSCAYCWDVEKSKIKLTFKGHSGYLRSVVARNSCNQIITGSEDGTARIWDC
RSGKCTNVIEPGKDKKSKEFFSYVSCIALDANEKWLACGSGRNLSVWNLSASERISGITT
RACIQDICFDDNQILAVGAEPVLSRYDINGVMLSQIQCVPRSTFSVSLHLSGVCSSFPVP
FLYSTPKRFLTIFNH
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggttcggaatccgaattcgggaaagatagacaaccaagaatcgtgtaaacagattgaa
tcatttgcaatcaccacaataacattccaccactttggcacaacagtcacatctaacgac
catcacaccaatgtcgctacagctgaaatgggacccgacaattgtcaccatcagaaaacc
atcaccatgagctccgaaatagaaaccaacaaaattataaatcaaggtcgcaactgtctc
catgatgcctacagagacagcatactagatgacctggaatccagttcactcaccatcttc
cgtacggtcttctctcctccgtctactactgatgaccgaaaccctaattacatcgtcgcc
gcctctagcgacggttcaatcgcatcgtattcgctatcctctctaatatcctccgtctca
ccagctgttgggagttctagggctcaaaatttatttgtagctgaaccagattgtttaatt
aatggacacgatgggcctacttatgatgtcaagttctatggcgatgctgaagattccttg
ctgttgagttgtggtgatgatggtcggattcgaggatggaagtggatggatatgtttgaa
gcaaagcataatggtggccttttgaagccgcaacttgacttagcaaatcctcaacataaa
ggtccttggggtgcactttctcctatccctgaaactaatgctattgctgttgatactcag
ggaggttccatatgtgcagctgctggtgattcatgtgcctattgttgggatgtggagaaa
tctaaaatcaaactgactttcaaagggcattctggttatctacgttctgttgttgcccga
aattcttgtaatcagattataactggctcagaggatggaacagccagaatttgggattgc
agaagtggaaagtgtactaatgttattgagccaggaaaagataagaaatctaaagagttc
ttttcatatgtcagttgcattgctcttgatgctaatgaaaagtggctggcatgtgggtct
gggcgaaatttatcagtgtggaatctttcagcttctgaaagaatttcagggatcacgaca
cgtgcttgcatccaagatatatgctttgatgataatcaaattttagctgtgggtgcagaa
ccagttttgagtcgttatgacataaacggtgttatgctgtctcagatacaatgcgtacct
cggtcaacattttctgtttccttgcatttatcgggtgtatgttcctcgtttccagttcct
tttttgtattcaactccgaaaagatttttaactatttttaaccattga

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