KEGG   Bidens hawaiensis: 143576740
Entry
143576740         CDS       T11418                                 
Name
(RefSeq) histone deacetylase 9-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bhw  Bidens hawaiensis
Pathway
bhw03082  ATP-dependent chromatin remodeling
bhw03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    143576740
   03083 Polycomb repressive complex
    143576740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bhw03036]
    143576740
Enzymes [BR:bhw01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     143576740
Chromosome and associated proteins [BR:bhw03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     143576740
   HDAC complexes
    Sin3A-HDAC complex
     143576740
    BRAF-HDAC complex
     143576740
    REST complex
     143576740
    SHIP complex
     143576740
    MiDAC complex
     143576740
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     143576740
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    143576740
  Chromatin remodeling factors
   NuRD complex
    143576740
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 143576740
NCBI-ProteinID: XP_076916882
LinkDB
Position
Unknown
AA seq 430 aa
MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLQRINPDTQHLFPEEMAKFKLGEDCPVFDDMFEFCQIYAGGTIDAARRL
NNQLCDVAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGNLFFPGSGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRIVKRFGLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPDEIPDNDYIKYFAPECSLRIPTAHIENFNSKSYLGTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEKNPDERIHQHTRDKQIQRDDEYYEGD
NDNDHNMDDV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgttcaaaagatcgaatttcatacttttacgatggagatgttggcaatgtttacttc
gggccgaaccatccgatgaagccgcaccggttatgtatgactcatcatctggtgctctcg
tatgatcttcacaaaaagatggaaatttatagacctcacaaggcttatccagttgagcta
gcacagtttcactcagcagattatgtggagttcttgcagcggattaaccccgacacgcag
catttgtttccagaagaaatggcaaagtttaagcttggagaagattgccctgtatttgat
gacatgtttgagttttgccaaatatatgctggtggaacaattgatgctgcacgaagatta
aataatcagctttgtgacgttgccataaattgggctggtggattacatcatgctaaaaag
tgtgaggcttctggattttgttatatcaatgatttggttttgggcattttggagcttctt
aaatatcatgcacgggttttatatattgatattgatgtgcatcatggtgatggtgttgaa
gaagccttttacttcaccgacagggtgatgacagttagttttcacaaatatggaaatctg
ttctttcctggatcaggtgatgttaaggaaattggggaacgagaaggaaagttttatgca
attaacgtccctttaaaggacggtatagacgacaccagctttacccgattgtttaaaacg
ataatatcaaaggttgttgaaacataccaaccgggtgtaatagttctccagtgtggggcc
gattcgcttgctggggaccgcttaggctgtttcaatctctcaatagatggacatgctgaa
tgtgttagaattgtaaaaagatttggtttgcccctgctggtaactggtggtggaggatat
acaaaagagaatgttgctcggtgttggactgttgaaacgggagttcttttagatacagag
cttcctgatgagattccagataatgattatatcaagtattttgctccagagtgttcgtta
aggattccaacggctcatattgaaaattttaatagcaagtcatacttgggcactataaag
atgcaagttctagaaaatcttcgatgcattcaacatgctccaagtgtacaaatgcaagag
gtcccacctgatttctatattcctgattttgatgaagatgagaagaaccctgatgaacga
atccatcagcacacaagggacaagcaaattcaacgtgatgatgaatactatgaaggagac
aacgacaacgatcataacatggatgatgtttga

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