Bidens hawaiensis: 143577712
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Entry
143577712 CDS
T11418
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143577712
09123 Folding, sorting and degradation
03018 RNA degradation
143577712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143577712
03041 Spliceosome [BR:
bhw03041
]
143577712
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143577712
mRNA degradation factors
5'-3' decay
Lsm complex
143577712
Spliceosome [BR:
bhw03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
143577712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
143577712
NCBI-ProteinID:
XP_076917586
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MLGGPGLESVVDQLISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQHVLG
LYIIRGDNISIIGELDEELDASLDLSEVRAQPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgctaggtggcccgggtcttgaatctgttgtcgatcaactcatttcggtcatcacaaat
gatggacgaaacatagtgggaattctaaaaggttttgatcaagcaacaaatataattctg
gatgaatctcatgaaagagtttattccaccaaggaaggagttcaacaacatgtgttgggt
ctttacatcattaggggtgataacataagcattattggggaacttgatgaggaacttgat
gcgagtctggatttgtcagaagtgagagcccaacctctgaagcctgttattcactaa
DBGET
integrated database retrieval system