Bidens hawaiensis: 143577942
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Entry
143577942 CDS
T11418
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
bhw Bidens hawaiensis
Pathway
bhw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143577942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143577942
Enzymes [BR:
bhw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
143577942
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
HECT type E3
143577942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
143577942
NCBI-ProteinID:
XP_076917769
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MGNRGQKRAETIDEFPADKRTCSSLEFRPSSSVSPTEITTPTTSTNQTHDHDMETSSSAS
GSGSARTDEDKDSAYGSCDSDEMVDAEHRKARNAILEYQRQRLSGDQEKFKRVLLVLNGE
SESDELAQEKALRELCEILSFCADSSLSSLMANSLSPVLIKLAGHETNPEIMLLSIRALT
YLCDSHPRSSGFIVRYNGIPVLCQRLLSIEYVDVAEQSLQALEKISREQPLACLQAGAIM
AVLTFIDFFSTSIQRVALSTVVNICEKLPSEGFSPFMDAVPILCQLLQYEDNQLVEHVAT
CLIKIAERVRGSPEMLDELSKHGLIHQVSHLIDLNNKTTLSQSVDTGLIGLLVKLASGSM
IAVKSLFDLNISRILKDILSTYDLSHRVPSPRAVGQSNQAHEVLKLLIQLLPVVARDHEV
LLTEEKSTFLVENPNFLKTFGNDMLHVLIQVVDTGVDLYICYGCLCVIDRLIYYINSDTL
LDLLKQVNISRFLAGVFTRKDRHVIMLALSISDTILKKTNDVFVDPFVKEGVLYAIDALM
VPEKGSSFMFSAFNDIQLSNDSSRKRCLCYSFDNCKSSSSSASASLNCKMENDGLQTLAR
NIRTTYFDKNASTSANGTTDILEKLKSLSAELASMITHSTPEEEYDNVLHQIMSHLNGSD
VISTFEFVESGITRSLVNYLSSGQCSRSVSDDNGSKSQHCVAERRLKTFGGLFWSNFSLS
DFMAKLQSGLSSVEDFPVVVSSVSKHRNSYATVPYRHCTTYPCLKVLFGKEDGELTLVEY
SGDAQNVDPLSDADAIGKFLWPKVCPESNKEDKNESVKSQNNVGSTSAESSDSVSHLSFY
LDGKQVDRALTLYQAVINHQKEKYETITHAELWNQIHKITYKKTSNLETTTTQDFGCHTC
QPSTLKKLLFSDIGSTVEKSTPCYNILFLLRILEAVNRLRFHIISHEKIHSFAQGRISEL
DGVRATSEGILGILQNEFVNTRLTEKLEQQMRDLLAISTGGMPSWCKELMSSCPFLFSFE
ARCKYFRLAAFSKLHSQTRVSSGSNSGIQNDSSMPRKKFLVYRHQILESAAKMMDLHASQ
KVVLEVKYDEEVGTGLGPTLEFFTLVSNEFQKPGLGMWRGDNVLDSGRVGSLFGLFPGPW
SPTGPTVSNNIEFSEVKRKFILLGQIVAKALHDGRVLDLPFSKAFYKLILGKELGLYDIQ
SFDPVLGKTLIEFRALVERRKYLKSVGEISADNLDPCFRDTKVKDLHLDFTLPGYPDYIL
ASGPDKEMVNSANLEDYIELVVDATINSGISRQMEAFKSGFNQVFPIINLHIFTDEELER
LLCGESETWNSNQLSDLIKFDHGYTASSPPILHFLEVIQEFDYEQQKAFVKFVTGAPRLP
LGGLASLNPKLTIVRKHCDKFVDADLPSVMTCANYLKLPPYSSKEMMKEKLLYAITEGQG
SFHLS
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgcgggcagaagcgagcggaaacgatcgatgagtttccagccgataaacga
acttgtagttcattggagtttagaccaagttcatcagtgtctccaacagaaataaccact
ccgaccacctcaacgaaccaaacccatgaccatgatatggaaacatcctcatctgcttct
gggtcaggctcggcccggaccgatgaggataaagattcagcatacgggtcgtgtgattca
gatgaaatggttgatgccgaacacagaaaagcccgaaacgcgattcttgagtaccaaagg
cagaggctttctggtgatcaagaaaagttcaaaagggtattattggtattaaatggtgaa
agtgaaagcgatgaacttgctcaagaaaaagcacttagagagctttgtgaaatactatcg
ttttgtgcggatagttcgctgtcgagtttaatggcgaactcgttgtcgcctgttcttatt
aagctcgcaggccatgaaacgaacccggagattatgcttttgtctattcgggctttgact
tatttgtgtgatagtcatcctcggtcttcgggttttattgttagatataatggcattcct
gttctctgtcagagattgttgtctattgagtatgtggatgtagctgaacagagtttgcaa
gcattagagaaaatatcacgtgagcaaccacttgcgtgtttacaggcgggtgcaataatg
gcggttcttacttttattgatttcttttctactagcattcagagggttgcgctttcgacc
gtggtgaacatatgtgagaagcttccctccgaagggttttcgccttttatggatgcggtt
ccaatattgtgccaacttcttcagtatgaggacaaccagcttgttgaacatgttgcaaca
tgtttaattaaaatagcagaaagagtgcgcggatcacccgagatgctggatgaactttct
aaacacgggttgattcatcaagtctctcatcttatagatttgaacaacaagaccacttta
tctcagtctgttgacactggtctaattggactacttgtgaaacttgcttctggttctatg
atagctgtgaagtcgctttttgatcttaatataagtagaattttgaaggatatattgtcg
acttatgatctttcgcacagggttccttcccctcgggccgttggtcaaagcaatcaggcg
catgaagttttgaaattgttgattcaactgctacccgttgtagctagagatcatgaggtc
ctgttgacagaagagaagtcaacatttttggtggaaaaccctaatttcttgaagacattt
gggaatgatatgttacatgttttgatccaggttgttgatacgggtgttgatttatacatt
tgttacggatgtttatgcgttatcgacaggctaatttattacatcaactctgatacactt
cttgatttgcttaaacaagtcaacatttcaaggtttttggcgggagtgttcactcgaaag
gatcgacatgtaataatgctagcacttagtatatccgacactatccttaaaaagaccaat
gatgttttcgtggacccttttgtaaaggaaggagttctttatgccatcgatgcacttatg
gtcccggaaaagggttcaagtttcatgttctcagcttttaacgatattcagttatcgaat
gattcgagtcgaaaacggtgcttatgttattcatttgacaactgtaagtcttcatcttca
tcagcttcagcatcactgaattgcaagatggaaaatgatggccttcaaactcttgcaaga
aacataaggacaacttattttgacaaaaacgcgtccacgtcagcaaacgggacaactgat
attcttgaaaagttgaaatctttatctgctgaattagcttctatgatcactcatagtact
cctgaagaagagtatgataatgtattgcatcaaatcatgtcacatcttaacgggtcggat
gttatttccacctttgaatttgttgaaagtggaattaccaggtcattggttaactatcta
tccagtggtcaatgttctaggagcgtttctgatgataacgggtcaaaaagtcaacattgt
gttgcagagagaagactgaagactttcggtggacttttttggtcaaacttttcgttatca
gactttatggctaaattacagagcggattatcttcggttgaagattttcctgttgtggtg
agcagtgtatccaaacacagaaattcatatgctactgttccgtataggcattgtaccaca
tacccgtgtctgaaagttctgtttggtaaggaagatggagagttgactttagttgagtac
tcgggcgatgctcaaaatgttgacccgctttcggatgctgatgcaattggaaagttctta
tggcctaaggtttgcccagaaagtaataaagaagataaaaatgagtctgttaaaagtcaa
aacaatgttgggtcaacttctgctgagtcatctgactctgttagtcatctatcgttttac
cttgatggaaagcaagttgaccgagcattgactttatatcaagctgttatcaatcaccag
aaagaaaaatacgaaactatcactcatgcagaattgtggaatcaaatacacaaaataact
tacaagaaaacatcaaatttagaaacaactaccacccaagattttggatgtcacacatgt
caaccatccaccttgaaaaaactactattttctgacatcgggtcaactgtggaaaagtca
actccgtgttacaacatattgtttcttttgagaatattggaagctgtcaacaggttaaga
ttccatataatatcacatgaaaaaatccactcgtttgctcaaggtagaattagtgaatta
gatggtgtaagagcaacaagtgagggtattttaggtattttacagaacgagtttgtaaac
actaggttaacagaaaagctagagcagcagatgcgggacctgttagccatatcgactggc
ggcatgccatcatggtgtaaagaactaatgtcatcatgcccgttcttgtttagtttcgaa
gcgcgatgcaagtacttccgtttagcagcattcagtaagcttcatagtcaaactcgggtt
tcatccgggtcaaactcgggtatccaaaacgactcttctatgcctcgaaaaaagtttctg
gtttaccgacatcagattcttgaatcggctgctaaaatgatggatcttcacgccagtcaa
aaagtggttcttgaagtgaaatatgatgaagaagttggaacgggcctcgggccaacattg
gagttttttacgctcgtgagtaatgagtttcagaaaccgggccttgggatgtggagagga
gacaatgttttggattctgggcgtgttgggtctttgtttgggctctttccaggcccgtgg
tctcctactgggcccacagtctcgaataatattgagttttctgaggtgaaacgaaagttt
atcttgttgggccagattgtggcgaaggcccttcatgatgggcgggttttggatcttcca
ttttctaaagctttttataaactaatacttggaaaggagctaggtttatatgatatacag
tcgtttgacccagttcttggtaagacccttatcgagtttcgggctcttgttgaaagaaga
aagtatttgaaatcagttggagaaatttcagccgataatcttgacccgtgctttcgggat
acaaaagtcaaagatttgcatcttgattttactcttccgggctatcctgattatattctc
gcttctgggcccgataaagaaatggtaaattctgcaaatttggaggactacattgaactt
gtggtcgatgcaacaataaattctggaatttctagacaaatggaggcttttaaatcaggg
tttaatcaggttttcccaatcatcaatcttcatatattcaccgatgaagaactagaacgt
ctcttatgtggagaaagtgaaacttggaattcaaatcaactctcggatctcatcaagttt
gatcatggatacactgctagcagccctccaattttacattttttggaggtcatacaagag
tttgattatgagcagcaaaaggcttttgtgaagtttgtgacgggtgctccacggcttccc
cttggtggtttggcatcactaaaccctaaactcacaatcgtacgcaagcattgcgataaa
tttgtggatgccgacctccctagtgtgatgacatgtgctaactatctcaaactgcctcca
tactcttccaaggaaatgatgaaggaaaagctgttatacgcaataacagaagggcaaggg
tcgtttcatctctcttaa
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