Bidens hawaiensis: 143579280
Help
Entry
143579280 CDS
T11418
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143579280
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
143579280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
pAdhesive_6
Beta_helix_3
EGF_Mua-3
NosD
Motif
Other DBs
NCBI-GeneID:
143579280
NCBI-ProteinID:
XP_076918765
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MFIKRITSVVPVLFFLLLQYASAKAATYNVLTYGAKANGRLDSRNAFLKAWNMACASTNP
AIIYVPTGRYLIASAVTFAGHTCKSKAITINIDGTLVAPSSYNAIGNAEVWIKFHRVNHV
TISGGTLDAQGAPLWACKSSGKTCPKGATTLGFYHSQNIVIRRLRSLNSQMFHILLYACN
NAKVQGVSIVAPGLSPNTDGIHLISSTGVTVLNSKIATGDDCISIGPGNSNLWIEKVVCG
PGHGISIGSLGWDLQEPGVQNVTVKSTTFIGTQNGVRIKTWARRSNGFVKNVVFQHSTMV
NVQNPIIIDANYCPNNENCPNQVSGVKISNVVYEDVHGTSATRVAVKFDCTKGKPCSGIR
LKDVNLRYGSQPAASSCSYVAGVASGLRGLTSCP
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgttcattaaacgtatcacatcggttgttccagtcttgttttttctactgttacaatac
gcgtcagcaaaagctgcaacatacaacgtccttacttatggagcaaaagctaatggccgc
ttagactcgagaaatgcattcctaaaagcatggaatatggcctgtgcttccactaatccc
gccatcatttacgtgcccactggcaggtatttgattgcatcggcggtcacgtttgccggt
catacatgtaaaagcaaagccatcacaatcaacatagatggtaccttggtggctccttct
agttataatgctatcggtaacgcagaagtgtggattaaattccacagggttaaccatgtt
accatctccggtggaacacttgatgcccaaggtgctcctttatgggcttgcaaatcatct
ggaaagacatgtccaaaaggagctacgacacttggcttctaccattcccagaacatagtg
atcagaaggttgaggtcattaaacagccaaatgtttcacattctgctatatgcatgcaac
aatgctaaagtacaaggagtgagcattgtggcacctgggctcagtccaaacacggacgga
atccatttaatatcatcaacaggtgtgactgtcttgaattccaaaatcgcgacaggagat
gattgcatctcaattgggccaggaaattctaatctctggatagagaaggtggtatgtggc
cccggtcacggtataagcatcgggagtctagggtgggatttgcaagaacccggtgtccag
aacgtaaccgtaaaaagcacgacgtttataggtacacagaatggtgtgaggataaaaaca
tgggcaaggcgtagcaatggatttgtgaagaacgttgttttccagcattcgacaatggtg
aacgtgcaaaaccctatcataatagatgcaaattactgcccaaacaatgagaattgcccc
aaccaagtttccggagtgaagatcagcaacgtggtgtatgaggatgtacatggaacatca
gcaactcgagtggcagtgaaatttgattgtaccaaagggaagccatgcagtgggatccgg
ctaaaggatgttaacctcagatatgggagtcaaccagcggcatcttcttgttcgtatgtt
gccggtgttgcttctggattgcgtggacttactagttgtccctga
DBGET
integrated database retrieval system