Bidens hawaiensis: 143579883
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Entry
143579883 CDS
T11418
Name
(RefSeq) protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143579883
03036 Chromosome and associated proteins [BR:
bhw03036
]
143579883
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
143579883
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
143579883
SLIK complex
143579883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
CHDCT2
Motif
Other DBs
NCBI-GeneID:
143579883
NCBI-ProteinID:
XP_076919173
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
MAFFRNYTNAAVSDIDLNDKRPGGNDDLETTSTMDKEFTTKSLNESDDNLLNLGDTNTNA
TRKPSGKWGSTFWKDCQPMNHRQGSDSGHESKSSSGYNIEDGSGNDLSEVNKGQNVDEML
SDDYYELDGDEQNDSMHHKFVNNAAGYGSIPQPRVSASNFLSRNKSKSSFRGDYVEDAEF
EDDDEEEEDEDDPADADFDPDLITTSDGRGKKVRDEDWDGEDLDEDDNFEDDELDISDDN
IYKKSSGIQRQKRGSKPSRESKPSISLSRRKRGRSRTSFDDEEDPNDSDDYFEVDFKSTR
RSSHPRKDTTKASGRFNEVRTSTRSVRKVSYVESDESEEHDEDAKKKTHKDEMEEEDGDS
IEKVLWHQPKGMAEEAMQNNKSTEPVLLNHLFDSEPDWYDTEFFIKWKGQSHLHCQWKSF
SQLQNLSGFKKVINYTKKVVEEIRHRRAVSREEIEVIDVSKEMDLDLIKQNCQVERIIAD
RLSKGLEVPEYLVKWQGLSYAEATWEKIDDIAFAQAAIDEYKAREAALAAAQGKMVDFQR
RKSKASLRKLDEQPDWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSM
LGFLQNSQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNMIVYVGTRASREVCQQYEFFSD
KNNGGTTKFDALLTTYEVLLKDKSVLSTIKWNYLMVDEAHRLKNSEASLYTTLKEFRTKN
KLLITGTPLQNSVEELWALLHFLDSDKFHSKDEFVQNYKNLSSFNENELANLHMELRPHI
LRRVIKDVEKSLPPKIERVLRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVE
LKKCCNHPFLFESADHGYGGDSGVTGSSKLERVILSSGKLVILDKLLDRLHETNHRVLIF
SQMVKMLDILAEYLSIKGFKYQRLDGSTKSEVRHQAMEHFNAPGSDDFCFLLSTRAGGLG
INLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSIEEDILERAKKKM
VLDHLVIQKLNAEGRLEKKEAKKGSGFDKNELSAILRFGAEELFKEDRNEEENKKRLLSM
DIDEILERAEKVEQKGAEGEPGNELLSAFKVANFCSAEDDGTFWSRWIKPEAIAHADEAL
APRAARNNSKSYAEEFPPERNNKRKKKNVEILDKNIKLRKADLISYQTPAIEGASAQTRG
WSYGTLPKRDATRFFRAVKKFGNDSQINLIAAEVGGCVEAAPVEAQVELFDALLDGCREA
VNGGSLDAKGPLLDFFGVSVKADDLLNRVEELQLLGKRINRYKDPISQFQALMYLKPATW
SKGCGWNQKDDARLLLGIHYHGFGNWEKIRLDEKLGLMKKIAPVELQHHETFLPRAPQLK
ERASQLLEMELVAVGGKSLGPKTGRKGSKKQQKDHPPNIPTSRAKGKQLKPSPVTNGKLK
MTRGKKNEALVKEEGEMSDTEEVYEQFKEVKWMEWCEDVLTQEKKTLERLHRLQTTSADL
PKEKVLSRIRNYLQILGQKIDQIVTDHEEDPYKQDRMTTRLWNYVSNFSNLSGGKLQQIY
SKLKQENEVASGVGTSQINPRGFRNQSSSGSLNNNKGGLDTAKFEAWKRRRRAESDPNTT
VHLQPRPSFSSPDPSLGILGPAPTHNTRPTRQSAFGPKQGFT
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggcattttttagaaactatacaaatgcagcagtttcagatattgatttgaatgacaag
aggccaggtggaaatgatgatttggaaacaacttctactatggataaagagtttacaaca
aagtcactaaatgagtcagatgataacttattgaatttaggggatactaatactaatgct
acaaggaaaccatcggggaaatggggttcaacgttttggaaggactgtcaaccgatgaat
catagacaggggtcggactcagggcatgaatcgaaaagcagttctggttataacattgaa
gatggatctggaaatgatttgtcagaagtgaataaaggtcaaaatgttgatgagatgttg
tctgatgattattatgagttggatggagatgaacaaaatgattcaatgcaccacaagttt
gtaaacaatgcagctggttatggttcaataccccagccacgtgtttctgccagtaacttt
ttgtctagaaacaagtctaaatcttcttttcggggtgattatgttgaagatgctgaattt
gaagatgacgatgaggaagaagaagatgaagatgaccctgcagatgcagattttgatcca
gatttaatcacaacaagtgatggaagagggaagaaggtacgtgatgaagactgggacggt
gaggatttagacgaagacgataactttgaggatgatgaattagacatctcagatgacaat
atttataagaaatcaagtggcatacaaaggcagaagcgtggttcaaagccaagtagagaa
tctaaaccatcaatatctttgagtcggaggaaaagaggtagaagtagaacatcatttgat
gatgaagaagatccaaatgattcagatgattattttgaagttgactttaaaagcactaga
agaagtagtcatcctcgcaaagatactacaaaagcttctggaagattcaatgaagttaga
acttcaaccagatccgtgcgcaaagtatcatatgttgaaagtgacgaaagtgaagagcat
gatgaagatgccaagaaaaagacccacaaggatgagatggaagaggaagatggtgactcc
attgagaaggtgctctggcatcagccaaagggcatggcagaagaagctatgcagaacaac
aaatctaccgagcctgtattgttgaaccatttatttgattcagagccagattggtatgat
actgaattctttataaaatggaaaggccaatcgcatttgcattgtcaatggaaatcattt
tctcaactacaaaatttgagtgggtttaaaaaggttataaattacactaaaaaagttgtg
gaagaaataaggcacaggagagcagtatctcgtgaggagattgaggtcattgacgtgagc
aaggagatggatttggatcttattaagcagaattgtcaggttgagaggataattgctgat
agactcagcaaaggcttggaagttccggagtatttggttaagtggcaaggactgtcttat
gctgaagcaacatgggagaagattgatgatattgcttttgcacaagcagcaattgatgaa
tataaggctcgagaagctgctcttgcagctgcacaaggaaaaatggtagattttcagcga
agaaagagtaaagcaagtttgagaaagcttgatgaacaacctgattggttaaaaggtgga
aaactgagagactatcaacttgagggcttgaattttcttgttaatagttggagaaatgat
acaaatgtgatattagctgatgaaatgggtcttggaaaaaccgttcagtccgtttctatg
ctggggtttcttcagaactcacaacaaattcatgggccttttcttgttgttgttccttta
tcaactttgtcaaattgggctaaagagttcagaaagtggcttcctgatatgaacatgatc
gtatatgttgggactcgtgcaagtcgagaggtttgccagcaatatgaatttttctctgat
aagaacaatggtggcactacaaagtttgatgcactattaacaacctatgaagttttacta
aaggataagtcggtgctatcaacaattaagtggaactatcttatggttgatgaagcacac
aggttaaaaaacagtgaagcatcattatatacaacactcaaggaattcagaacgaaaaac
aagcttcttattactggcactcctctgcaaaacagtgtggaagaattatgggcgttgctt
cactttcttgactcggataaattccatagcaaggatgaatttgttcaaaattacaagaat
cttagttcatttaatgaaaatgagcttgctaatcttcatatggagttacggccccacatt
ctgcggagagttataaaggatgtggagaaatcattgccaccgaagattgagcgggttctt
cgggttgagatgtcccctctacagaagcagtattacaagtggattctggaacgcaatttt
catgacttgaacaaaggtgtacgtggaaatcaggtttctcttttaaacattgtggttgag
ttgaagaaatgctgtaatcatccattcctgtttgagagtgctgatcatggttatggtggt
gactctggagttactggtagcagtaaactggagcgagtaattcttagcagtggaaaacta
gtaatccttgataagcttcttgacagattgcatgaaaccaatcaccgtgttttaatattt
tcacagatggttaagatgttggatattttagcagaatacttgtcaattaagggattcaag
tatcaaagacttgatggaagtacaaagtctgaggtacgccaccaagccatggagcatttt
aatgcaccgggcagtgatgatttctgcttccttctttctacccgtgctggtggtctaggt
atcaatcttgcaactgccgatacagtcatcatatttgactctgactggaatcctcaaaat
gatctgcaggcaatgagtcgagctcacagaattggacagcaagaggttgttaatatttat
aggtttgtgacaagcaagagtatcgaggaagacatcttggaacgtgcaaaaaagaaaatg
gtacttgatcatttagttattcagaagctaaatgctgagggaagattggagaagaaagag
gctaaaaaaggaagtggatttgacaagaacgagttatctgctattttgagatttggggcg
gaggaactgttcaaagaagatagaaatgaagaagaaaacaaaaaacgtcttctaagcatg
gatattgatgaaattcttgaaagagcagagaaagttgaacagaaaggagctgaaggagaa
ccaggaaatgaattgctaagtgcatttaaggttgcaaatttctgctctgctgaagatgat
ggaactttctggagccggtggattaaacctgaagccattgcacatgctgatgaagcttta
gctccacgagctgcaaggaacaacagcaagagttatgctgaggaatttccacctgaaaga
aataataaaaggaaaaagaaaaatgttgaaattctagacaaaaatataaagcttcgaaaa
gctgatttgataagttaccaaactccagcaattgagggagcttctgcacaaacaagaggt
tggtcatatggcaccttgcctaagagagatgctacacgttttttccgtgcggttaagaag
tttggaaacgacagccaaattaacttaatagcagcggaggttggtggctgtgttgaagct
gccccagtagaggcacaggttgagcttttcgatgcattattagatggttgcagagaagct
gttaatggaggaagtctggatgcaaagggcccattgttggatttttttggtgtttctgta
aaggctgatgatctactaaaccgtgttgaagaacttcaacttctcggaaagcgcattaac
cgctacaaagatccaatttcacagtttcaagctttgatgtatctcaaacctgcaacttgg
tctaaaggttgtgggtggaaccagaaggatgacgcacgattgctattagggatccattat
catggatttggaaactgggaaaagataagactagatgaaaagctcggtcttatgaaaaag
atcgcccctgtggaacttcaacatcatgaaacattcttaccacgggcccctcagttaaaa
gaacgagcttcccaacttcttgaaatggaacttgtggctgttggtggcaagagtttaggg
cccaaaacgggccgaaagggttctaaaaagcagcaaaaggatcatccacccaacattcca
acttcgcgtgcaaaagggaaacagttgaaaccatcacccgtcacaaatgggaaactgaaa
atgacacgtggcaagaagaacgaggcgttagttaaagaagaaggtgagatgtcagacact
gaagaagtatatgaacagttcaaggaagttaaatggatggaatggtgcgaagatgtgttg
actcaagagaaaaagacacttgaacgccttcataggctgcaaactaccagtgccgatctt
cctaaagaaaaggttctttctagaattagaaattatctacagattcttgggcaaaagatt
gaccagattgttactgaccatgaggaggatccatacaagcaagataggatgacaacacga
ctctggaactacgtctcaaacttttcaaacttatcgggcggtaaacttcaacaaatatat
tccaaactcaaacaagaaaacgaggttgcgtcaggagttggtacatctcaaatcaacccg
agaggttttagaaatcaatcatcgtctggatcacttaacaacaacaaaggtggtctcgat
acagcaaagtttgaagcatggaaaagaagaagacgggccgaatctgacccaaacacaacc
gttcatttacaaccacgaccatctttctcctcacccgacccaagtttagggattctggga
cccgcaccaactcataatactagacccacccgccagtctgcttttggtccaaaacaaggc
ttcacatga
DBGET
integrated database retrieval system
