KEGG   Bidens hawaiensis: 143580724
Entry
143580724         CDS       T11418                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
bhw  Bidens hawaiensis
Pathway
bhw03018  RNA degradation
bhw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143580724
  09123 Folding, sorting and degradation
   03018 RNA degradation
    143580724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhw03019]
    143580724
   03041 Spliceosome [BR:bhw03041]
    143580724
Messenger RNA biogenesis [BR:bhw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     143580724
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     143580724
Spliceosome [BR:bhw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    143580724
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 143580724
NCBI-ProteinID: XP_076919786
LinkDB
Position
Unknown
AA seq 136 aa
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE
VIDKVQEETKNRMDRKPPGVGRGRGRGGNDVGGGRRQGKGGGMGSRGGMDDGGRGRSQAV
GGYPGGNRGGGRGGRG
NT seq 411 nt   +upstreamnt  +downstreamnt
atgctggtggagcttaaaaatggtgaaacatacaatggccatttggtgaactgcgacacc
tggatgaatattcatcttcgtgaagtgatttgtacctccaaagatggtgataggttctgg
agaatgcctgaatgttacatccgtggaaacacaataaagtatcttcgtgtaccagatgag
gtgattgacaaggttcaggaagaaaccaagaaccgcatggatagaaagccacctggtgta
ggacgtggaaggggaaggggcggtaatgatgttggtggcggcaggagacaaggtaaaggt
ggtggcatgggcagtcgtggtggcatggatgatggtggtagaggcaggagccaagctgta
ggaggttatcctggtggcaacagaggtggaggccgtggtggtcgtggatga

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