Bidens hawaiensis: 143582551
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Entry
143582551 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143582551 isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
bhw Bidens hawaiensis
Pathway
bhw03013
Nucleocytoplasmic transport
bhw03015
mRNA surveillance pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143582551
09122 Translation
03013 Nucleocytoplasmic transport
143582551
03015 mRNA surveillance pathway
143582551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143582551
03041 Spliceosome [BR:
bhw03041
]
143582551
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143582551
Spliceosome [BR:
bhw03041
]
Complex C
Other components
EJC/TREX
143582551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
143582551
NCBI-ProteinID:
XP_076921195
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MIFDQVGEKSEMSSTSAVLENRPLDQWKVTELKDELKKRNLITKGLKDELVKRLDEAIRT
ELEDGNQTHYNGVGEDVDQPDYATAEPVVSEKTTSIVDDTSAKSESLENNNMTVKLDING
SLEKDNMTENLRDENSDRVIEVSQVKSDSISIDTVTVTEKIDLKVNIIAADDDKSEPVVK
PDDVSVAESVNIFKKNDSGDVGSPEKLNLDRSSGDESMEDHVLESKQVNSISEITEAPVV
KDGELVDVMVDDTHAAKITECSKDESDLSVRPIKRKLHDQEATTNSEVVKRQCKWNSQHQ
TTNSPVSTMPKDAFPASMKHRFLKSDSSVSHEGPKERVVPPSSKAPTTSLRIDRFLRPFT
LKAVEQLLGKTGTVVSFWMDNIKTHCYVIYSSVEEAIETRNAVYNLQWPKNGGHLLIAEF
VDPSEVKARTEPPPAATKPPQLSQLPPPPPLPLPPPPPAATRPPRQTQLLPPPPLPLPPP
PPLYHPPASREPAVAVALPPPPPLPENMKPPVVTLDDLFRKTRATPRIYYLPLSTDEVAA
KLKRNEKQSAGRKEVMEPRKKRSFCDSCRRLPICFRLQCHDSVKTRICFCLLLHLKH
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgatatttgaccaggttggagaaaagtcagagatgtcttcaacgagtgcggtccttgaa
aaccgcccccttgatcagtggaaagtaactgagctaaaagatgaacttaagaaaaggaat
ctaattactaaaggactgaaggatgaacttgttaaaaggctggatgaagctatccgtact
gaattggaagacggtaaccaaactcattacaatggtgtcggtgaggatgttgaccagcct
gattatgcaacagcagagccagttgtttcagagaaaaccaccagcattgttgatgacaca
agtgccaaaagcgagagcctagaaaacaataacatgactgttaagttggatattaatggg
agcttagagaaagataacatgacagagaatttgcgtgatgaaaacagtgatagggtaatt
gaggtcagccaagtaaaatctgattctatttctattgatactgtgacagttactgaaaag
attgacctaaaggttaatataattgccgctgatgatgacaaatcagaacctgttgttaag
cctgatgatgtcagcgttgctgaaagtgtaaatatattcaaaaaaaatgacagcggagac
gtgggttcccctgaaaagctgaatttagatagaagttctggtgatgaatcaatggaggat
catgtattagagagtaaacaagttaattccatatctgagataacagaagcgcctgtggtg
aaggatggtgagcttgttgatgttatggttgacgatacacatgctgccaagattactgaa
tgtagtaaagatgaaagtgatctttctgtgaggcccataaaaagaaagcttcatgatcaa
gaagcaacaacaaacagtgaggtagtaaagcgacaatgcaagtggaattctcaacaccaa
accactaattctcccgtctctactatgcccaaggatgctttcccggcttctatgaaacac
cggtttttaaaatctgattcttcagttagccatgaggggccaaaagaacgtgttgttcct
ccatcatcaaaggctccaaccacttctcttagaattgatcggtttctgcgcccttttact
ttaaaggctgtggaacaacttcttggcaaaacgggtacggtggttagtttctggatggat
aatatcaaaactcactgttatgttatttattcatcagtggaagaagctatagagacccga
aatgctgtgtacaacctccaatggccaaaaaacggaggccatctgcttatagccgagttt
gtagatccatcagaggtgaaggctcgaacagaaccacctccagccgccacaaaaccacca
cagctatcacagcttcctcctccacccccactcccgctaccacctccacctccagccgcc
acaagaccaccacgacaaacacagcttcttcctccacccccgctcccactaccacctcca
ccaccactttaccatccaccagcatcaagagaaccagcagtagcagtagcccttcctcca
ccccctcccctccctgagaatatgaaaccgccagtcgtgacattggatgatctgttccgg
aagacaagagcaacccctcgaatctactacctgccattatcaactgatgaagttgcagca
aaactgaagaggaatgaaaagcagtctgcaggtaggaaggaagtcatggagccgaggaag
aagaggtcgttttgtgatagttgtcgacgacttcccatttgttttagactccaatgccat
gattcggttaagactcgtatctgcttttgtttacttcttcatctaaaacattga
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