KEGG   Bidens hawaiensis: 143584383
Entry
143584383         CDS       T11418                                 
Name
(RefSeq) histone deacetylase 19-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bhw  Bidens hawaiensis
Pathway
bhw03082  ATP-dependent chromatin remodeling
bhw03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    143584383
   03083 Polycomb repressive complex
    143584383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bhw03036]
    143584383
Enzymes [BR:bhw01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     143584383
Chromosome and associated proteins [BR:bhw03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     143584383
   HDAC complexes
    Sin3A-HDAC complex
     143584383
    BRAF-HDAC complex
     143584383
    REST complex
     143584383
    SHIP complex
     143584383
    MiDAC complex
     143584383
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     143584383
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    143584383
  Chromatin remodeling factors
   NuRD complex
    143584383
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 143584383
NCBI-ProteinID: XP_076922569
LinkDB
Position
Unknown
AA seq 497 aa
METGGNSLASGPDGSKRKVYYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMH
VVKPVPARDKDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDYCDIAINWAGGLHHAKKCEASGFCYVNDIVLSILELLKVHQRVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKYYSLNVPLDDGI
DDESYQSLFKPIIGKVMEVYRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGVELEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQLLDEIRSKLLDNLSKLQHAPSVQFQERPPDTEFPEADEDQEDDDRRSDDSDDENE
GKSFVGRVKRELHDTESKDMVMDDIKESEHASAREMDASFAEISLKGSNSGSVPAADVKM
EQGNSTKPDPPISDMNL
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggaaactggaggaaattcattagcatctggaccagatggatcaaagagaaaagtgtac
tatttttatgatccagaagttgggaattactattatggacaaggtcacccaatgaagcca
cacagaattcgcatgacacatgcgcttttagctcactacggtttactacaaaacatgcat
gtagtaaagcctgttcccgctcgggacaaagatctatgcaggtttcatgctgatgattat
gtttcctttttaagaggcatcactccggaaacacagcaagatcagttgagacagttgaaa
cggtttaatgttggtgaagattgccctgtgtttgatggcctgtactcgttttgtcagacg
tatgctggcggttcggttggtggtgcagttaagttgaaccatgattattgtgatattgct
ataaattgggctggcgggctgcatcatgctaagaaatgtgaagcatctggtttctgctat
gttaatgatattgtgctgtcaattcttgagcttctgaaagtgcaccagcgtgtgctatat
gtagacattgacattcatcatggtgacggagtggaggaagcgttttacacaaccgatcgt
gtaatgaccgtgtcgtttcacaaatttggagattatttccctggaacaggggatataaga
gacattggatattcaaaaggaaaatattattccctaaatgtccctcttgatgatgggatt
gacgatgaaagttatcagtcattatttaagccaataattggtaaagttatggaagtgtat
aggcctggtgcggttgtgttacaatgtggtgcggattctttatcgggagacagattaggc
tgttttaatctatcaattaaaggtcatgctgaatgtgtgagatatatgagatcttttaac
gtgcccttgttgttgcttggtggtggaggctatacgattcgaaatgttgctcgatgctgg
tgctacgagactggagttgcacttggagttgagttagaagataaaatgcctcaacatgag
tattatgagtattttggtcctgattatacgcttcacgtggctccaagtaatatggaaaat
aagaactcgcgtcagctcttggatgaaataagatcaaagcttcttgataatctttctaag
cttcaacatgctccaagtgtgcaattccaagaacgccctcccgataccgaattccctgag
gcagacgaagatcaagaagacgacgatcgacgatcagatgattctgatgatgaaaacgag
gggaagtcgtttgttggacgtgtgaaaagggaacttcatgataccgagtctaaggacatg
gtaatggatgatataaaagaaagtgaacatgctagtgctagagagatggatgcatcattt
gctgaaatatctctaaagggttcaaattcgggttcagtaccagcagcagatgtgaagatg
gaacaagggaactcaaccaagccagatccacctatctccgatatgaatctataa

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