Bidens hawaiensis: 143585910
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Entry
143585910 CDS
T11418
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143585910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143585910
03110 Chaperones and folding catalysts [BR:
bhw03110
]
143585910
03029 Mitochondrial biogenesis [BR:
bhw03029
]
143585910
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhw04147
]
143585910
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
143585910
Messenger RNA biogenesis [BR:
bhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
143585910
Chaperones and folding catalysts [BR:
bhw03110
]
Heat shock proteins
HSP60 / Chaperonin
143585910
Mitochondrial biogenesis [BR:
bhw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
143585910
Exosome [BR:
bhw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143585910
Exosomal proteins of other body fluids (saliva and urine)
143585910
Exosomal proteins of breast cancer cells
143585910
Exosomal proteins of colorectal cancer cells
143585910
Exosomal proteins of bladder cancer cells
143585910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Nbl1_Borealin_N
Motif
Other DBs
NCBI-GeneID:
143585910
NCBI-ProteinID:
XP_076923699
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MSFLSNSSSTALAFTANLLSFLSNNNIFIGFLLKISIICKYWKASGTVIWSRNYVAKDIQ
FGTRARAAMLLGVNQLAEAVKVTMGPKGRNVIIEQSFGSPKVTKDGVTVAKSINFEEKLK
NVGANLVKQVASATNSTAGDGTTCATVLTQAIFNEGCKSVAAGVNVMDLRSGINMAVNAV
ITELKSQALMISTPEEITQVATISANGEREIGELLARAMEKVGKEGVITVADGNTLDNEL
EVVEGMKLGRGYISPYFVTDTKTQKCELEHPLIFIHDKKISDINALVKILEIAVEKRRPL
LIVAEDIESELLAMLIINKRQAGLKVSKPFFDCKAPGFGDNRRANLEDVAVLTGGEVISE
ERGLTLNDVRLEKLGTAKKVTVSLDDTIILHGGGDKKQIEERCEELRSTIENSTAMFDKE
KAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDALNATRAAVEEGIVPGGGVALLYAT
RVLKSLQTANEDQKSGVEIVENALKAPTFTIISNAGGDGATVIGKLLEQDDLHYGFDAAQ
GKYVNMVKAGIIDPLKVVRTALVDAASVSLLLTTTESTIVDRQGEKNPLANRMPNMDDMG
MGY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctgtcaaacagttcgtctacagccctagcatttactgccaatttgttatcc
tttctttcaaataacaacatattcattggtttcttattaaaaatctccattatctgtaaa
tactggaaggcatccggtacagttatttggagcagaaactatgttgcaaaagatatccag
tttggaactagggctcgggctgccatgctgcttggtgtgaaccagctagctgaagctgta
aaagtcacgatgggacccaaggggcgtaatgttattatcgagcaaagttttggaagtcca
aaagtcacaaaagatggcgtaactgtagcaaaaagcatcaactttgaagagaagttgaaa
aatgttggtgctaatttggtgaagcaggttgccagtgcaactaattctactgctggagat
ggtacaacgtgtgctactgttttgacacaagcaatattcaatgaaggttgcaaatctgta
gctgcaggtgtaaatgtcatggatttacgaagtggtatcaatatggcagttaatgctgtt
ataactgaattgaaaagtcaagcattgatgattagtacaccagaagaaattacacaggta
gccactatctctgccaatggagaacgagaaattggcgagctgctggcaagagctatggag
aaagttggtaaagaaggcgttataaccgttgctgatggtaatactttggataatgagcta
gaagttgttgaggggatgaagctaggccggggttacatctctccttattttgtcaccgac
acaaagacacaaaaatgtgaattggagcatccattgatctttattcatgacaaaaaaatt
tcagacattaatgcacttgtcaaaatcttggagattgctgttgagaaacgtagacccttg
ctgattgtggctgaagatattgaaagtgaactgctggcaatgctgatcattaacaagcgt
caagctggacttaaggtttcaaagccattttttgattgtaaagctcccggttttggagat
aacaggagagccaatttagaggatgtggcagtgcttacaggaggggaggttataagcgag
gaacgtggattaaccctaaatgatgttcgacttgagaaacttggtactgcgaaaaaggtt
actgtatctcttgatgatactataattctacatggcggtggagataagaagcaaattgaa
gaaagatgtgaagaattgcggtcaaccattgagaatagtacagccatgtttgacaaagag
aaagctcaagagaggttgtcaaagttgtcaggtggcgttgcagtcttcaaggttggagga
gctagtgaggccgaagttggagaaagaaaggatagggtaacagatgctttaaatgccaca
agagcagcagtggaagagggaatagttccaggtggtggagttgctcttctatatgctact
agggttcttaaaagccttcaaactgcaaacgaggatcagaagagtggagttgaaatagtc
gaaaacgcccttaaggcgcctacgtttacaataatttcaaatgccggtggtgatggtgcc
acggttattggcaaactattggaacaagatgatcttcattatggatttgatgcagcccaa
ggcaaatatgttaacatggtgaaggctggaattatagatcctctaaaagttgtgagaaca
gccttagtagatgctgccagtgtctcgttattgttgaccaccacagagtcaaccattgtg
gaccgtcaaggagagaaaaacccacttgcaaataggatgccaaacatggatgatatggga
atgggatattga
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