Bidens hawaiensis: 143586395
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Entry
143586395 CDS
T11418
Name
(RefSeq) protein CHROMATIN REMODELING 8-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
bhw Bidens hawaiensis
Pathway
bhw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
143586395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhw03036
]
143586395
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143586395
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
143586395
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
143586395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
HDA2-3
ResIII
WHD_SOWAH
GFO_IDH_MocA_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
143586395
NCBI-ProteinID:
XP_076924070
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MNEVEEDRALLSSLGVTSANPDELEHDILEQARNHDEQGSQVEVTNESSSTSQTDVLNRL
RAINVEIDAVACTIENVNNIARTEECANNNDDESGPSDGKESILQGSNDLTLQHALATDR
LESLKRTKAQLEKEVASLGIKPKVSKQENILKYLVKEELNHKRKQKEVPKTSKKLKRHKT
VSFSDDGDFDAVLNAASSGFVETERDKLVRKGILTPFHNLKGYERRIEEAGPSNTAEEVN
EVNDFSSASIARAVQSMSEAANARPTTKLLDPDSLPRLEPPTRPFQRLRTPFKNSQSQKN
GEKSRDSNKKKRRPLPEKRWRKRASREQNLLDENDDTRGSSIEDDNQEDDEAAEEGDEDT
FVKLEGGLNIPDSIFSQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFVGAL
HFSKMYKPSIIICPVTLLRQWKRESKKWYPNFHVEILHDSAQDSSHKKKQTKSDESDYAT
MESDEDEKIYSKSNKKWDSLINHVLRSESGLLITTYEQLRILGEKLLDIEWGYAVLDEGH
RIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFEAEFAV
PISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPSKTEHVLFCSLTSD
QRSRYQSFLASSEVEQIFNGERNSLYGIDVMRKICNHPDLLEREHAAQNPDYGNEERSGK
MKVVKQVLRVWKEQGHRVLLFAQTQQMLDILENFLIGDGYTYRRMDGLTPVKQRMVLMDE
FNNSEEVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQTKDVTVY
RLITRGTIEEKVYQRQIYKHFLTNKILKNPQQKRFFKARDMKDLFRLNDDRDNDNTETSN
IFSQLSQDVNIVGSNASNPNEIPATRTKKSSKNKEKEKIDDCNEQEGEETSILKSLFDAQ
GIHSAVNHDLIMNANDEQKVKLDEQASQIAHRAAEALRQSRMLCSRDGISVPTWTGRSGT
AGAPGPSVTRKCGSTVNSKLVTKTRADEGPSNNKRFAAGALGGKALSSSELLAKIRGTRE
QAAGDALDNQFVAGSSSSSSGRTRLSRDLGGVQSEVLIRQICTFLQQRDGSSDSASIVKH
FKERIPTEDLPLFKSLLKEIATLEKSPNGSSWILKPEYH
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtggaagaagatagagctctgttgagtagtcttggagtcacgtcagcgaat
ccagacgaacttgaacatgatatattagaacaggcaagaaaccatgatgaacagggcagc
caagtggaagttaccaatgaatcatcatccaccagccaaacagatgttcttaatagatta
agagctataaatgtcgaaatagatgctgttgcatgcacaattgaaaatgtgaacaacatt
gcaagaaccgaagaatgtgcaaacaataatgatgacgaaagtggaccgtcagatggaaaa
gaaagcattttgcaaggttctaatgatctaacccttcagcatgctctagcaactgataga
ttggaaagcttaaagaggacaaaggctcaactcgagaaagaagttgcaagtttgggaatc
aaacctaaagttagtaaacaagaaaacatcttgaaatatcttgttaaagaagaactgaat
cacaagcgcaagcagaaagaagttccaaaaacaagtaagaagttgaagcgacataaaaca
gtatccttcagtgatgatggtgattttgatgctgttttaaacgcggcatctagtggattt
gttgaaacagaaagagacaagttggttagaaaagggattctaactccttttcataactta
aaaggatatgaacgccgcattgaggaagcaggaccatctaatacagctgaagaagtcaat
gaagtcaacgatttttcttctgccagcatagcaagagctgttcaatcaatgtcagaggct
gcaaatgctcgtcctacaacaaagctgttagatccagattctttaccaagacttgaacca
ccaacacgtccttttcaaagacttagaaccccttttaaaaattctcagtctcagaaaaat
ggagaaaaatctagagattcaaataagaaaaaaagacggcctttgcctgagaaaagatgg
aggaaacgagcatctcgtgagcagaatcttttggatgaaaatgatgacacgcgaggctct
agtattgaagatgacaatcaagaagatgatgaagcagcagaagaaggtgatgaagatact
tttgtgaaactagaaggtggattaaatattccagattctattttcagtcaactctttgac
tatcaaaaagttggtgtgcaatggttgtgggagcttcattgccaaagagcaggtgggata
ataggagacgaaatgggccttggaaaaaccattcaagttttatcatttgttggagctctg
catttcagtaaaatgtataaaccgagtattatcatatgtccagtcacacttttgagacaa
tggaaaagagaatcaaaaaaatggtatccaaactttcatgttgaaatactacacgattct
gctcaagattcttctcataaaaagaaacaaaccaaatcagatgaaagtgattacgcaact
atggagagtgatgaagacgaaaaaatatattcaaaaagcaacaagaagtgggactcttta
ataaaccatgttttgagaagtgaatctggtttgttgattactacttatgaacagttgagg
attcttggtgaaaaactgcttgatattgaatggggatatgcggtattagatgaaggacat
agaataagaaaccctaacgcagaagtgactttggtttgcaaacagttacaaaccgttcac
cgtattataatgacgggtgcacctattcagaacaaattaagtgaactttggtcattgttt
gactttgtatttcctggaaagttgggtgtcttgcctgtatttgaagccgaatttgcagtt
ccaatttctgttggtggttatgctaatgcttcacctttgcaagtatccactgcttacaga
tgcgcggttgttctacgtgacttaataatgccatatcttcttagaagaatgaaagccgat
gtaaacgcacaacttccatcaaaaaccgaacacgttctgttttgcagtcttacatcagac
caacgatctagataccaatcatttctcgccagctctgaagttgaacaaatcttcaacgga
gaaagaaactcactttatgggatcgatgtaatgcgtaaaatctgcaatcatcctgattta
cttgaaagagaacacgcagcccaaaatcctgattatggaaacgaagaacgaagcgggaaa
atgaaagttgttaaacaggtacttagggtttggaaagaacagggtcatagggttcttctg
tttgcacagacgcaacagatgcttgatattcttgagaattttttgatcggtgacggttat
acgtacagacggatggacgggttgacacctgtcaaacaaaggatggtgttgatggatgag
tttaacaattctgaggaggttttcatatttattttgacaactaaagttggtggactcggg
acgaatttgaccggtgccaatagagtgatcatctttgaccctgattggaatccgtccact
gacatgcaggcgagagagcgtgcatggcgtattggtcaaacaaaagatgtaacagtttat
agactaataacccgaggaacaatagaagaaaaggtgtatcaacgacaaatatacaaacat
tttttaacaaacaaaatcttaaaaaacccacaacaaaaaagattcttcaaggcccgagac
atgaaagatcttttcagattaaacgatgatagagataacgacaatactgagacatctaat
attttcagtcagttatctcaagatgtaaatattgttggttctaatgcaagcaatccaaat
gagattcctgcaacacgcaccaaaaagtcatccaaaaataaagaaaaagaaaaaatcgat
gattgtaacgagcaagaaggcgaggaaacaagtattttgaaaagtctctttgatgctcag
gggattcatagtgcagtgaaccatgatctaataatgaatgccaatgacgaacaaaaagtg
aagcttgatgagcaagcttcccaaatcgcccaccgggccgcggaagcgttacgccagtcg
agaatgctttgtagccgagacggtatctcggtcccgacctggaccgggagatctggaact
gcgggtgcacccgggccatctgtaacccggaagtgtgggtcaaccgtgaactctaaattg
gttaccaaaacccgagctgatgaagggccgtctaacaacaaacggtttgctgcgggtgca
ttgggtggtaaagcgttatcttcctctgaattacttgcgaagattagagggactcgtgag
caagcggctggtgatgcacttgacaaccagttcgttgcagggtcaagttcgagttccagt
ggccggacccggttgtctcgtgacttgggtggggtgcaatctgaggttttgatccgtcaa
atttgtacttttttacaacaacgagacgggtcaagtgattcggctagtatagtgaagcat
tttaaagagaggattccgacagaggatttgcctctgtttaagtctctcttgaaggagatt
gcaactttggagaaaagcccgaatgggtcgtcgtggattttaaaacccgagtatcattaa
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integrated database retrieval system
