Bidens hawaiensis: 143586676
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Entry
143586676 CDS
T11418
Name
(RefSeq) protein ALTERED SEED GERMINATION 2-like isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
bhw
Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143586676
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
143586676
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
NBCH_WD40
TPR_19
TPR_17
ASA1
Beta-prop_DCAF12
TRM82_WD
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_VPS8
ARM_TT21_5th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Pex26
Beta-prop_WDR19_1st
TPR_14
ANAPC3
Motif
Other DBs
NCBI-GeneID:
143586676
NCBI-ProteinID:
XP_076924275
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MDSLCFHDGNITDFIDSRTLHVRTDVNRSLQLHSSFIRRLSLERELEGHRGCVNTIAWNS
SGTLLISGSDDTCVNLWSYQSRKLLHSIDSGHTANIFCTKFVPETSDELVVSGAADAEVR
LFNLSRLRRRGVEDSTLSPSALFQCHSRRIKKLAVEPGNPNLVWSASEDGTLRQHDFREC
TSCPRSETSHRECHNVLLDLRCGAKKSLADPPRQSLVLKSCDISSTRPHLLIVGGSDAFA
RLYDRRMLPPLSSGRNKLPPPPCVNYYCPVHLSDHGRQGLHLTHVTFSPNGEEILLNYSG
EHVYLMDVNPVQGSSMRYTPDDAMKFFNPATILKEVQSKPPLSDSQNRFPAKRNLAARLD
QCRKLLQIAEKSLKEGANYYYGIEACNDVLHGHGQIGHTLMLECLCLRAALLLKRDWKND
THMAIRDCFKAVEIDPTSFRALHCMSEALLQLGKLKEAMDFIIAAQFAAPSNPEAAEIVA
SIKKRIITAEAEASNKAREGGPSSETTRASRVLSLSDILYRSDASSDTSQPMSERENSDY
EDDLEVDFENSVSGDESHEVESNNFQPSLNVRIHRKGDSGKNIFNTSSSCGSPKSSSPSD
KITRQHERAIDMKQRYIGQCNVGTDIKHASFLGQKGEYIASGSDDGRWFIWEKGTGRLIK
MLLGDGAVVNCVQSHPYDCVVATSGIDNTIKIWTPLASVPSAVAGGAAGPETANVIEAME
GNQRRLSHNRESLLPFEILEGFRMHEFPEGSLRPFECIQS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggattcgctctgctttcacgacggcaacatcaccgacttcattgattctcgaactctt
cacgttcgcaccgatgtgaatcggagtttgcaattgcattcatcgttcattagaaggctt
tctctagaaagagaattggaggggcatcggggatgtgtaaatactattgcttggaactca
agtggtacacttttgatatctggatctgatgacacttgtgtcaatctttggagttaccaa
agccgaaaactcttgcattcgattgacagtggtcatactgcgaacatattttgtacaaaa
tttgttcctgaaacatctgatgaattggttgtatctggagctgctgatgctgaagttcga
ctattcaatttgtctcgcttaagaaggaggggtgttgaagatagcactcttagcccatca
gcactatttcaatgccacagcaggagaatcaaaaaactagctgtagaacctgggaatcca
aatttggtatggagtgccagcgaggatgggacattgagacaacatgattttagggagtgc
acttcttgtcctcgttctgaaacctctcaccgagaatgtcacaatgtgttacttgatttg
cgatgcggagcaaaaaaatcattagctgatccaccaagacagtcacttgtgctgaaatct
tgcgacatcagcagcactaggcctcatttactcattgttggtgggagtgacgcatttgct
cgtttatacgatagacgtatgcttccaccactctcttctggccgcaacaaactaccacca
cctccttgtgttaactactactgcccagtgcatctctctgatcatggacgacaaggcttg
catcttactcatgttacatttagtccaaatggggaagagattcttctcaattatagtggt
gaacatgtctacttaatggatgtaaatcctgttcagggaagttctatgcggtacacgcca
gatgatgcaatgaagttttttaacccagctaccatattgaaggaggtgcaatctaaacca
ccactttcggattcccaaaaccgttttcctgcaaagagaaaccttgcagctaggcttgat
caatgccgaaaacttcttcaaattgcagagaagtccttaaaagagggagccaattattac
tatggtattgaggcttgtaatgatgttttacatggtcatggtcagattggacacacactg
atgcttgaatgtttgtgtttacgggctgcattgcttctgaagcgtgattggaaaaacgat
actcatatggccatacgagactgttttaaagctgtggaaattgatcccacttcatttaga
gccctacactgcatgtctgaagctctattacagttaggtaagctcaaagaagccatggac
tttatcattgctgctcagtttgcagctccatctaatcctgaagctgctgagatagttgcg
agtataaagaaacgtatcattactgctgaagctgaagcttctaataaggcaagggaagga
ggtccgagttctgaaacaacacgagctagtagagtattatcactgagtgacatactttat
agatctgatgcgagtagtgatacttcacaacctatgtctgaaagagagaactctgattat
gaggatgatttggaagttgattttgaaaattcagtatcaggtgatgaaagccatgaagtt
gaatctaacaactttcagccgagtttaaatgttagaatccatagaaaaggtgattcagga
aagaatattttcaatacaagtagctcttgtggatcaccaaaatcgtcttctccaagtgac
aaaattactcgtcagcatgagagggcaatagatatgaagcaaagatatattggccagtgt
aatgtagggacagacatcaaacatgccagttttcttgggcaaaaaggggagtacattgct
agtggaagtgatgatggtagatggttcatctgggaaaagggcactggcagattaattaaa
atgcttcttggggatggagctgttgtgaactgcgtgcagagtcatccgtatgattgtgtt
gtagcaactagtggcatagataataccattaagatttggaccccacttgcttcagttcca
tcagctgttgccggaggagcagccggacctgagactgctaatgttatagaggcaatggaa
ggcaatcaacgcagattatcgcataaccgtgaatcattgttgccattcgagatattagaa
gggttccggatgcatgagtttcctgaaggatcgttgcgcccatttgaatgtatacagagc
tag
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