Bidens hawaiensis: 143586871
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Entry
143586871 CDS
T11418
Name
(RefSeq) vacuolar sorting protein 18-like isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
bhw Bidens hawaiensis
Pathway
bhw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
143586871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhw04131
]
143586871
Membrane trafficking [BR:
bhw04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
143586871
Hops complex
143586871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
VPS18_RING_C
zf-RING_11
zf-RING_Vps41
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-rbx1
RPN1_RPN2_N
Nup54_57_C
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
143586871
NCBI-ProteinID:
XP_076924440
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MDYKRQVFTVDLLERYAAKGHGVITCMASGNDVIVLGTSTGWLIRHDFGVGDSYDIDLST
GRADQSIYKVFVDPGGSHCLAYVIGNGASDTYYMHAKWPKPRVLTKLKGLVINTVAWNRQ
QITEASTREVILGTDNGQLHEIAVDEKDKREKYVKFIFQLSDMPEAFKGLQMETASFNTG
TRYCIMAVTPTRLYCFTGIGSPEAVFASYVDRAVHFMELPGDIPNSELHFFIKQRRAVHF
AWLSGAGIYHGGLNFGAQNRSSNGAVSFVENKALLDYSKLSDGGEVVKPSSIALSEFHFL
LLIGNRVKVVNRISEQIVEELYFDQTSESASKGIIGLSIDASAGLFYAYDENSIFQVSVT
DEGRDMWKVYLDLKEYAAALANCSDPYQRDQVYLEQAETAFSAGDFFRAASFFAKINYAL
SFEEITLKFIGIGEQDALRTFLLRKLDNIGKDDKFQIMMISTWATELYLDKINRLLLEDD
SPEKRNSEYQSILMEFRAFLSDSKDVLDEATTMKILESYGRVDELVYFASLMEQHGIVIH
HYIQQGEAKRALDVLQKPGVSVELQYKFAPDLIMLDAYETVESWMTRKDLNPRKLIPAMM
SYSSEPHAKNETHEVIKYLEFCVHRLQNEDPGVHNLLLSLYAKKEDDSALLRFLQCKFGK
GRPNGPDFFYDPKYALRLCLKEKRMRACVHIYSMMFMHEEAVALALQVDPELAMAEADKV
EDDEDLRKKLWLMVAKHVVEQEKGTKRDNIRKAIAFLKETDGLLKIEDILPFFPDFALID
DFKEAICSSLEDYNQQIEKLKEEMNDATHGADNIRNDISALAQRYTVVDRDEECGVCKRV
ILPSTDHRVSRGYTTIGAMAPFYVFPCGHAFHAQCLVAHVTKCTDRHQAEYILDLQKQLT
LMSVEPKDGVNGGLSGDELTTSMTPIDKIRSQLDDAIASECPFCGDLMISEISKPFVLPE
ESYLVSSWEIMSKNVGSEKGIAFVV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggattacaaaaggcaggtgtttaccgttgatcttctagaaagatatgcagcaaaaggt
catggagttattacttgtatggcgtctggaaatgatgtcattgttcttggaaccagtact
ggatggctaatcagacatgattttggtgttggtgattcctatgatattgatctctctact
ggtcgtgctgaccagtcgatctacaaagtttttgttgatcccggtgggagtcattgtctt
gcctatgtaattggaaacggtgcttctgatacctactacatgcacgcaaagtggccaaag
cccagagtcttgaccaaacttaaaggtcttgtcatcaacactgttgcctggaatagacaa
cagataactgaagcttccacacgagaggttattcttggtactgataacggtcaactgcat
gaaattgctgttgatgagaaagacaagagggaaaaatatgtaaaatttatatttcaacta
tctgatatgccagaagcttttaaagggttacagatggaaacagctagctttaacaccgga
actagatactgtattatggcagtaactccaacaaggctttattgttttacgggtatcgga
tctccagaggctgtctttgccagttatgtagaccgtgcagtgcattttatggagcttcct
ggagatattccaaatagtgagctgcatttcttcattaaacaaagaagagcagtgcatttt
gcttggctttcgggagctggtatttatcatggtggtctgaattttggggcacaaaacaga
tcgtcaaatggggctgtaagttttgtggagaataaagctcttttggattattcaaaatta
agtgatggtggtgaagtggttaaacctagttctattgcactctcagagtttcacttcttg
cttctaattggaaacagagtgaaggttgtaaatagaatcagtgagcaaattgtggaagaa
ctttattttgaccaaacatctgagtcggcatcaaaggggataattggcttatccattgat
gcatctgctggcttgttctatgcatatgatgaaaactcaatctttcaggtctcggtaacg
gatgaagggcgagatatgtggaaagtgtatctggacttaaaggaatatgctgctgctttg
gcaaattgttctgatccttaccagagagaccaagtatatttagaacaggctgaaactgcc
ttttcagcaggggacttctttagagcagcatctttctttgctaaaatcaactatgcattg
tcatttgaagaaatcacattgaagtttataggtataggtgaacaggatgcgttaaggacg
tttttattacggaagcttgataatattgggaaagatgataaatttcaaataatgatgata
tctacatgggccactgaactgtaccttgacaagatcaatagattactgctggaagacgac
tcacccgagaagcgtaattcagaataccaatcaattcttatggaattccgtgcttttctt
agtgacagtaaagatgtgttggatgaagcaactacaatgaagatacttgaaagctatggt
agagttgatgaattggtgtattttgctagtctaatggaacaacatgggattgtcattcat
cactacattcagcaaggagaagcgaaaagagccttagatgtacttcaaaaacctggtgtt
tctgttgaacttcagtataagtttgctccagatctcatcatgcttgatgcatatgaaacc
gttgaatcatggatgacccgaaaagacttgaatccaagaaaactgattcctgcaatgatg
tcttattcaagtgaacctcatgcaaagaatgaaacccatgaagtaatcaagtatttagaa
ttttgtgttcaccggttgcagaacgaggatcccggtgttcataacctcttgctctctcta
tatgccaagaaggaagacgacagtgcccttttgcggttcttacaatgcaaatttgggaaa
ggacgacctaatgggcctgacttcttttacgaccctaaatatgcattacgtctttgctta
aaagaaaaacgtatgcgtgcatgtgttcatatttacagcatgatgtttatgcatgaagaa
gctgttgcacttgctcttcaggttgacccggagctcgcaatggctgaagcagacaaagtg
gaagatgatgaagacctgaggaagaagttatggcttatggttgccaaacatgttgttgag
caggaaaaaggtactaaaagagataatattagaaaagcaattgcgtttcttaaagaaacc
gatggtctgttaaagattgaagatatcttaccattcttcccggactttgcactaattgat
gactttaaggaagcaatttgttcatctttagaggattataatcagcaaattgagaaatta
aaagaggagatgaatgacgcgacacatggtgcggataatataagaaatgacataagtgcc
cttgctcaaagatatacagtcgttgaccgtgatgaagaatgtggggtttgcaagcgggtg
attttgccttctactgatcatcgtgtgtcaagaggttatacaacaattggggcaatggca
cctttttatgtgttcccgtgtggacacgcgtttcatgcacaatgccttgttgcgcatgtt
accaaatgtactgatcgacatcaagccgagtatatactggatcttcaaaagcagctcact
ttaatgagtgtggagccaaaggatggtgtaaatggtgggttaagtggtgatgagttgacc
acaagtatgacacctattgacaagattcggtcgcagctagatgatgcaatagcaagcgaa
tgtccattttgtggggatttgatgataagcgagatttcaaaaccgtttgttttaccagag
gaatcatatctggtttcttcatgggagattatgtccaagaatgttggaagtgagaagggt
attgcgtttgtcgtgtga
DBGET
integrated database retrieval system
