Bidens hawaiensis: 143587602
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Entry
143587602 CDS
T11418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143587602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143587602
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143587602
Spliceosome [BR:
bhw03041
]
Complex A
U2 snRNP components
U2 related factors
143587602
Complex B
143587602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143587602
NCBI-ProteinID:
XP_076924965
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MEDLKHKSSKKDEYVKKDDDLKRGHREKERNGERRRERERDRDRSVDEKYKEREKHKERH
RDKEKEKERERKEREREKERERERERLKEKENREKERERERLKEKENREKERERRERRER
EERDREKRREAERDHNVDDVKDRDRKRRRRDDEYKESSKGSSRRREDSVDNGEVKDSSDK
KVSRTREEDMEEEQRKLDDEMEKRRRRVQEWQEKRRKKEESEREQLGVTDEAAGKTWTLE
GESDDEEAVPVENADVEMDDVKDGNRNADDMVNGLDNGDGDGDGDNTVVASQNGGDMEED
EIDPLDAFMDTMVIPEVNKLISTEPSVVDQKSTELTNDDKNKDKKKKNGGRSMGRIIPGE
ESDVEYSDVENDDDTIEDEDDDEFMKRVKKTKVEKLSLVDHSKINYIEFRKNFYIEVKEI
KKMTQEEVAAYRKELELKVHGKDVPKPIKTWYQTGLTTKVLETIRKLNYDKPMPIQAQAL
PVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPELGSGDGPIGLIMAPTRELVQQIHS
DIRKFTKVIGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRV
SYLVMDEADRMFDMGFEPQIMRIVQNIQPNRQTVLFSATFPRQVEVLARKVLNKPVEIQV
GGRSVVNKDITQLVEVRPENERFFRLLELLGEWYVKGKVLIFVQSQDKCDALFKDLIKHG
YPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINYDVPNHYEDY
VHRVGRTGRAGRKGCAVTFLSSEDERYAPDLVKALELSNQAVPDDLKALADAFMAKVNQG
LVQAHGTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDIAQ
QAVIAQAAALAAASQQPATSSVPTLPGILGTMAGVAGANDGAARAAALAAAMNLQHNLAR
IQADSLPEHYEAELEINDFPQNARWKVTHKETLGPVAEWTGAAITTRGQYIQPGRIPGPG
ERKLYLFIEGATEQSVKRAKAELKRVLEDITTQALSLPSAQPGRYSVCFRL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttgaagcataaatctagcaagaaggatgaatatgttaaaaaagacgatgat
ttgaagcgagggcatagagagaaggagcggaacggtgagaggcgtagagagcgggagcga
gatcgagataggagtgtcgatgagaagtataaggaacgagagaagcataaagagagacat
agagataaggagaaggagaaggagagagagcggaaggagagggagagagagaaggaacgt
gaacgggaacgggaaaggttgaaagaaaaagagaatagagagaaggaacgtgaacgggaa
cggttgaaagagaaggagaaccgagagaaggagagggagaggagggagaggcgagagcgg
gaggagagagatagggagaaacggagagaagcggagcgggatcataatgttgatgatgtg
aaagatagggatagaaagaggcgaagacgggacgatgagtataaggagagtagtaagggt
tcgagtagacggagagaggatagtgtggataacggtgaggtgaaggattcttcggataag
aaagtgtcgaggacgcgtgaagaagatatggaagaagaacagaggaagttggatgatgag
atggagaaacggaggcggagagtgcaggaatggcaggagaaaagacggaagaaagaggag
tctgaaagggaacagcttggagtgacggatgaggctgcgggtaagacgtggacgttggaa
ggcgagtctgatgatgaagaagctgttcctgtggagaatgcagatgttgagatggatgac
gtgaaggacggaaatcgaaacgcggatgacatggttaacggattagataacggtgatggt
gatggtgatggtgataatactgttgttgcttcgcagaatggcggtgatatggaagaagat
gaaattgatccgttagatgcgtttatggacaccatggtgatacctgaagttaacaagttg
atcagtaccgagccttctgttgtagatcaaaagagtaccgagttaacgaatgatgataag
aataaggacaaaaagaaaaagaacggtggcagatcaatgggtaggattattcccggtgaa
gaatctgatgtagagtattcggatgttgaaaacgatgacgatactatagaagacgaagac
gatgacgagtttatgaaacgagtgaaaaaaaccaaggttgaaaaactatcacttgttgat
cactcgaagatcaattacattgaattccgaaagaatttttatattgaagtgaaggagata
aagaagatgactcaagaagaggttgccgcgtatagaaaagaattggaactaaaagtacat
ggaaaagacgtaccgaagccgattaaaacgtggtaccaaacgggactcacgacgaaagtt
ttggaaacgattagaaagctgaattacgataaaccaatgcctattcaagcgcaagcgttg
ccagttataatgagtggtcgagattgtatcggtgttgcaaagacgggctctggtaaaacg
ctagcttttgttctaccgatgttgaggcatataaaggatcagccggaacttggttccgga
gacgggcctatcgggcttataatggcacctacacgagagcttgttcagcagattcacagt
gatatacgaaagttcaccaaggtaatcgggcttcgctgcgtgcccgtgtacggtggttct
ggtgttgcacaacaaataagcgagttgaaacgaggggctgaaatcgttgtttgcacacca
ggtaggatgattgatattttgtgtaccagtgctgggaaaatcacgaatctgagacgggtt
tcttatttggttatggatgaagctgatcgtatgtttgatatggggttcgagccgcaaatc
atgagaatcgtgcagaacatccaaccgaatcgccagacggtgcttttttctgctacgttt
cctcgccaggtggaggtgttggcccggaaagttttaaataagcccgtggagatacaggta
ggtggaagaagtgtcgtgaataaagatataacgcagttggtggaagtgcggcccgaaaac
gaaaggttttttagacttttggagttacttggagaatggtatgtaaaaggtaaggttttg
atatttgttcagtcacaggataagtgtgacgctttgtttaaagatttgattaaacacggg
tacccgtgtttatcgcttcacggggctaaagatcagaccgatagagaatcgaccatttcc
gatttcaagagtaacgtatgcaacttattaattgcgactagtatcgctgcacggggtttg
gatgttaaagagcttgagctcgtgataaattacgacgtaccgaatcattacgaagattac
gttcatcgtgtcggccgtacgggtcgagcggggagaaaagggtgtgcggtcacgttttta
tcgagtgaagacgagcgatacgcgccggatcttgtgaaagcgttggagttgtcgaatcaa
gcggttcctgatgatttgaaagcgcttgctgacgcgtttatggctaaggttaaccagggg
cttgtgcaggctcatggtacaggttacggtgggagcgggtttaagtttaatgaagaggaa
gatgaagttaggaaagcggcaaagaaagcacaggctaaagaatacgggtttgaagaagat
aagtcagattcggaagacgaggatgacggtgtgcgaaaagcaggcggcgatatcgcgcag
caggcggttattgctcaagctgccgcccttgctgccgccagtcaacagcctgctactagt
agcgtaccgactctgccgggtattcttggaacgatggcgggtgttgctggtgctaatgac
ggcgctgctagggctgcagcgttggcggctgcgatgaacttgcagcataatttggcgagg
attcaagcggattctttgcctgaacattatgaagcggagttggagattaatgatttcccg
cagaacgccaggtggaaggtgacacataaagagaccctcggtccggttgctgagtggacc
ggagctgccattaccactaggggccagtatattcaacctggaaggatcccgggacccggt
gagagaaaactttatctgttcattgaaggagctactgaacagtctgttaaacgggccaaa
gcagaactgaaacgtgtcctggaagacatcacaacacaggcgttatctcttccaagtgca
caaccgggacgttactctgtttgtttcaggttatag
DBGET
integrated database retrieval system
