Bidens hawaiensis: 143588438
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Entry
143588438 CDS
T11418
Name
(RefSeq) protein CHROMATIN REMODELING 8-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
bhw Bidens hawaiensis
Pathway
bhw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
143588438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhw03036
]
143588438
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143588438
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
143588438
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
143588438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
HDA2-3
WHD_SOWAH
AAA_30
GFO_IDH_MocA_C
Motif
Other DBs
NCBI-GeneID:
143588438
NCBI-ProteinID:
XP_076925553
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MKEEEKDRALLSSLGVTSANPDELEQDILEQARNHDEQGSQVEVTNESSSTGQTDVLNRL
RAINVEIDAVACTIEDVKNIARTEERANNNDDESGPSDGKESILQGSNDLTLQHALANDR
LESLKRTKAQLEKEVASFGINPKVSKQENILKYLVKEEPNNKRKQKEVPKTGQKLKRHKI
VSFSDDGDFDAVLNAASTGFAETERDKLVRKGMLTPFHNLKGYERRIEEAGPSNTAEEGS
GFNDFSSASISRAVKSMSEAANARPTTKLLDPDSLPRLEPPTRPFQRLRTPLKNPQSQKN
EGEKSRDSNRKKRRPLPEKRWRKRASREQNLLDENDDTRGSSIEDDNQEGDDEEAEEGDE
DTFVKLEGGLNIPNSIFSQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLG
ALHFSKMYKPSIIICPVTLLRQWKREAKKWYPNFHVEILHDSAQDSSHKKKQTKSDESDY
ETTESDEEEEKIYSKSNKKWDSLINRVLRNESGLLITTYEQLRILGDKLLDIEWGYAVLD
EGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFEAE
FAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPSKTEHVLFCSL
TSDQRSVYQSFLAGSEVEQIFNGERNSLYGIDVMRKICNHPDLLEREHAAHNPDYGNEER
SGKMKVVKQVLKVWKEQGHRVLLFAQTQQMLDILENFLIAEGYTYRRMDGLTPVKQRMVL
MDEFNESEEVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQTKDV
TVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQQKRFFQARDMKDLFRLNDDRDNNGTE
TSNIFSQLSQDVNIVGSNASSPNENHTTRTKKSSKNKEKEKEKEKIDDCNEQEGEETSIL
KSLFDAQGIHSAVNHDLIMNANDEEKVKLDVQASQIAQRAAEALRQSRMIRSRDSISVPT
WTGRSGIAGAPGPSVTRKFGSTVNSKLVTKARADEGPSNNKRFAAGALGGKALSSSELLA
KIRGTREQAAGDALGHQFSAGSSSNDRARSTRDLGGVQPEVLIRQICTFLQQRDGISVSA
SIVKHFKERIPTEDLPLFKSLLKEIATLEKNPGGSSWILKPEYH
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaggaaaaagatagagctctgttgagtagtcttggagtcacatcagcgaat
ccagacgaacttgaacaagatatattagagcaggcaagaaaccatgatgaacagggcagc
caagtggaagttaccaatgaatcatcatccaccggccaaacagatgttcttaatagatta
agagctataaatgttgaaatagatgctgttgcatgcacaattgaagatgtgaaaaacatt
gcaagaaccgaagaacgtgcaaacaataatgatgacgaaagtggaccatcagatggaaaa
gaaagcattttgcagggttctaatgatctaacccttcaacatgctctagcaaatgataga
ttggaaagcttaaagaggacaaaggctcaactcgagaaagaagttgcaagttttggaatc
aaccctaaagttagtaaacaagaaaacatcttgaaatatcttgttaaagaagaaccaaat
aacaagcgtaagcagaaagaagttccaaaaacaggtcagaagttgaagcggcataaaata
gtatccttcagtgatgatggtgattttgatgctgttttaaacgcggcttctactgggttc
gctgaaacagaaagagacaagttggttagaaaagggatgttaactccttttcataaccta
aaaggatacgaacgccgcattgaggaagcaggaccgtctaatacagctgaagaaggcagt
ggatttaacgatttttcttctgccagcatatcaagagctgttaaatcaatgtcagaggct
gcaaatgctcgtcctacaacaaagctgttagatccagattctttaccaagacttgaacca
ccaacacgtccttttcaaagactcagaacccctttaaaaaatcctcagtctcagaaaaat
gaaggagaaaaatctagagattcaaacaggaaaaaaaggcggcctttgcctgagaaaaga
tggaggaaacgagcatctcgtgagcagaatcttttggatgaaaatgatgacacacgcggc
tctagtattgaagatgataatcaagaaggtgatgatgaagaagcagaagaaggtgatgaa
gatactttcgtgaaactagaaggtggattgaatattccaaattctattttcagtcaactc
tttgactatcaaaaagtaggtgtacagtggttgtgggagcttcattgccaaagagcaggt
gggataataggagacgaaatgggcctgggaaaaaccattcaagttttatcatttcttgga
gctctacatttcagtaaaatgtataaaccgagtattatcatatgtccagtcacacttttg
agacaatggaaaagagaagcaaaaaaatggtatccaaactttcatgttgaaatactacac
gattctgctcaagattcttctcataaaaagaaacaaaccaaatcagatgaaagtgattat
gaaactactgagagtgatgaagaagaagaaaaaatatattcgaaaagcaacaagaagtgg
gattctttaataaaccgtgttttgagaaatgaatctggtttgttgattactacttatgaa
cagttgaggattcttggtgacaaactgcttgatattgaatggggatatgcagtattagac
gaaggacatagaatacgaaaccctaatgcggaagttactttggtttgcaaacagttacaa
accgttcatcgtattataatgacgggtgcacctattcagaacaaattaagtgaactctgg
tcattgtttgattttgtatttcctggaaagttgggtgttttgcctgtatttgaagccgaa
tttgcagttccaatttctgttggtggttatgctaatgcttcacctttgcaagtatccact
gcttacagatgcgcggttgttctacgtgatttaataatgccatatcttcttagaagaatg
aaagcggatgtaaacgcacaacttccatcaaaaaccgaacatgttctgttttgcagtctt
acatcagaccaacgatctgtataccaatcatttctcgccggctctgaagttgaacaaatc
ttcaacggagaaagaaactcactttatggaatcgatgtaatgcgtaaaatttgcaatcat
cctgatttacttgaacgagaacacgcagcccataatcccgattatggaaacgaagaacga
agcgggaagatgaaagttgttaaacaggtacttaaggtttggaaagaacagggtcatagg
gttcttctgtttgcacagacgcagcagatgcttgatatacttgagaattttttgatcgct
gagggttacacgtatagacggatggatgggttgacacctgtcaaacagaggatggttttg
atggatgagtttaatgagtccgaggaggttttcatatttattttgacaactaaagttggt
ggactcgggacgaacttgactggtgccaatagagtgatcatctttgaccctgattggaat
ccgtccactgacatgcaggcgagagagcgtgcatggcgtattggtcaaacaaaagatgta
acagtttatagactaataacccgaggaacaatagaagaaaaggtctatcaacgacaaata
tacaaacattttttaaccaacaaaatcttaaaaaacccacaacaaaaaagattcttccag
gcccgagacatgaaagatcttttcagattaaacgatgatagagataacaacggtaccgaa
acatcgaatattttcagtcagttatctcaagatgtaaatattgttggttctaatgcaagc
agtccaaatgagaatcatacaacacgcaccaaaaagtcatccaaaaataaagaaaaagaa
aaagaaaaagaaaaaatcgatgattgtaacgagcaagaaggcgaggaaacaagtattttg
aaaagtctctttgatgctcaggggattcatagtgcagtgaaccatgatctaataatgaat
gccaatgatgaagaaaaagtgaagcttgatgtacaagcttcccaaatcgcccaacgggcc
gcggaagcgttacgtcagtcaagaatgattcgcagccgagacagcatttcggtcccgacc
tggaccgggagatctgggatcgcgggtgcacctggtccatctgtaacccggaagttcggg
tcaactgtgaactctaaattggttaccaaagcccgagctgatgaagggccgtctaacaac
aaacggtttgctgcaggtgcattgggtggtaaagcgttgtcttcctctgaattacttgcg
aagattagagggactcgtgagcaagcggctggtgatgcacttggccatcagttcagtgcg
ggttcgagttccaatgacagggcccgctcgactcgtgacttgggtggcgtgcaaccggag
gttttgatccgtcaaatttgtacttttttacaacaacgagacgggataagtgtttcggct
agtatagtgaagcattttaaagagaggataccaactgaggatttgcctctgtttaagtct
cttttgaaggaaattgctactttggagaaaaacccgggcgggtcgtcgtggattttaaaa
cccgagtatcattaa
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integrated database retrieval system
