KEGG   Bidens hawaiensis: 143588918
Entry
143588918         CDS       T11418                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
bhw  Bidens hawaiensis
Pathway
bhw03013  Nucleocytoplasmic transport
bhw03015  mRNA surveillance pathway
bhw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    143588918
  09122 Translation
   03013 Nucleocytoplasmic transport
    143588918
   03015 mRNA surveillance pathway
    143588918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhw03019]
    143588918
   03041 Spliceosome [BR:bhw03041]
    143588918
Messenger RNA biogenesis [BR:bhw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     143588918
    TREX complex
     143588918
Spliceosome [BR:bhw03041]
 Complex C
  Other components
   EJC/TREX
    143588918
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    143588918
SSDB
Motif
Pfam: RRM_1 FoP_duplication F420H2_quin_red RRM_3 YHR127W_C
Other DBs
NCBI-GeneID: 143588918
NCBI-ProteinID: XP_076925926
LinkDB
Position
Unknown
AA seq 280 aa
MASLDMSLDDMIKSRRTTVRGRDRGRGRARGGRGQQRSFGGGRPTGPPRRGPLAVNARPS
AYTIAKSFRKPKNSPWQHNLLEESLTAAGVPGFDNGAKLNISNLDIGVTNSDIRELFSEI
GELKRYAIHYDKHGRPSGSAEVLFARRSDAFQALKRYNNVQLDGKPMKIEIEGSNTKVPV
SARVNVVGGLNGQRTVVMTSRMGRGRGATAANRSFGQRHGGGTRNGRGGMINTRGGSVGG
RGRGRGQSSGRGRGRGRKPAVDKSADELDKELENYHAMQS
NT seq 843 nt   +upstreamnt  +downstreamnt
atggcatctttggatatgtcgcttgatgatatgataaagagtaggcgtactactgttaga
ggtagagatcgaggtcgtggtcgggcccgtggtggccgaggtcaacaaaggtcatttggt
ggtggaagaccaacagggccacctcgcagaggtccccttgctgtcaatgctcggccatca
gcttatactattgccaagtctttccgcaaaccaaagaattcaccttggcagcacaacttg
cttgaagagagtttaactgcagcaggtgttcccggattcgataatggcgcaaaattaaac
atttccaacttggacattggagtgacaaattcagatattagggaacttttctctgagatt
ggagagctgaaaagatatgcaattcattatgacaaacatggtcgtccaagtggctcagct
gaagtgttgtttgctagaagaagtgatgcttttcaggcattaaagcggtataacaatgtg
caattggacgggaagcctatgaagattgaaattgaagggtccaacactaaggttcctgtt
tctgctcgtgtcaatgttgttggaggtttaaatggccagaggacggttgtgatgacgtca
agaatgggccgaggtagaggtgctactgcagctaatcgttcatttgggcagagacacggt
ggaggtacaaggaacggtcgtggtggtatgataaacacacgtggcggcagtgttggtggt
cgtgggcgaggtcgtggtcaaagtagtggtcggggtcgcggtcgaggcaggaagccagct
gtggacaagtcggctgatgaactcgataaggaactcgagaactaccatgctatgcagagt
tag

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