Bidens hawaiensis: 143589737
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Entry
143589737 CDS
T11418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143589737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143589737
03009 Ribosome biogenesis [BR:
bhw03009
]
143589737
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143589737
Spliceosome [BR:
bhw03041
]
Complex A
U1 snRNP components
U1 related factors
143589737
Complex B
143589737
Ribosome biogenesis [BR:
bhw03009
]
Eukaryotic type
Pre-60S particles
Helicases
143589737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143589737
NCBI-ProteinID:
XP_076926535
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MNHYDDRVADAGSYHQRRSVFIGAPPMAGYPPPGAPLSYAHAPGGPAPFRGPPPVPPPFV
GAGRGVVGNGYPPFEPGVRGGFNIGVGGGARGGRGLSRGGGGGGGRGGFDGGRGGGGGGR
GGRGFDSGRGGRRGGGGGRGGRDGGHRGGGRDGGRGSSGGGRGGGRGFSSGGRGGGRGFD
GGRGGGRGFDGGRGGGRGGRSGGSKGDLDSITLPKQDFGNLVPFEKNFYIECQSVSAMPD
HEVAMYRGRWEITVEGNDVPKPVRMFHEAGFPAYCLEVISSLGFVEPTPIQSQGWPMALK
GRDLIGIAETGSGKTLSYLLPALVHVAAQPPLAQGDGPIVLVLAPTRELAVQIQQEAGKF
GAHSRIRSTCIYGGAPKGPQIRDLQGGVEIVIGTPGRLIDMLEARHTNLKRVTYLVLDEA
DRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPKEVESLARQFLCNPYKVIIGSPALKAN
QSINQIVEVVTDVEKYTRLVKLLKEMMDGNRILIFVETKKGCDQVTRQLRMDGWPALSIH
GDKSQDERDWVLAEFKSGRSLIMTATDVAARGLDVKGIKCVINYDFPTSLEDYVHRIGRT
GRAGAKGIAVTFFTHSNVKHARELVNILQEAGQAVPVALSSMTRSMGPGAGSGGSFRSRG
RGGGGRGAISGTNTVPLGSKAHW
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattacgacgacagagttgccgatgccggctcataccaccagcgtcggagtgtt
tttattggagcaccacctatggccggatatccgccacccggtgctcctttgagttatgct
catgctcctggtggaccggctccgtttcgaggtccgccgccggtaccgcctccttttgta
ggcgcgggaagaggcgttgtaggaaatggatatcctccttttgagcctggagttagagga
ggttttaatatcggtgttggtggtggtgcgagaggagggagggggttaagtaggggcggt
ggcggtggcggtggaagaggaggatttgatggtggtagaggtggcggtggtggtggcaga
ggcggtagaggttttgattctggtcgtggcgggagaagaggcggtggtggtggaagaggt
gggcgtgacggaggtcatcgtggtggtgggcgtgacggagggagagggtctagcggtggt
ggaagaggtggagggagggggtttagtagtggtggacgaggtggtggtaggggttttgat
ggtggacgaggtggcggtaggggttttgacggtggtcgtggcggtgggagaggtggaaga
agtggtggctcgaaaggagatttggatagtataacgttaccgaaacaggattttggcaac
ttggtaccgtttgaaaagaatttctacattgagtgtcagtctgtaagtgccatgcctgac
catgaggtggcgatgtatcgtggtaggtgggaaattactgttgaaggtaatgatgtcccg
aaaccagtccgaatgtttcacgaggcaggttttcctgcttattgtctagaagttatatct
agtctgggatttgttgagccgacaccgattcagtctcaaggatggcctatggctttaaag
ggaagagatttaattgggatagctgagaccggttctggcaagactttgtcatatttgttg
cctgcgttggttcatgttgctgcacaacctccattggctcaaggagatggtcccattgtg
ctagtattggctcctactcgagaactggctgtacaaatccaacaagaagctggaaagttc
ggggcacattctagaataagaagcacttgcatatacggtggtgctcctaagggaccacag
attcgtgatcttcaaggaggggtggagattgttattggcacaccgggtcggttaattgat
atgctagaagcccgtcatacaaacttgaagagagtgacttaccttgtcttggatgaagct
gatcgtatgttagatatgggatttgagcctcaaatcaggaaaattatatcacagatcaga
cccgacaggcagactctttattggagtgcaacatggcctaaagaggttgagagtttagca
agacagtttctatgcaatccatacaaggttatcattggatcacctgcgctgaaagcgaat
cagtcaataaatcagattgttgaagttgtaacagatgtggaaaagtatactaggctggtg
aaactgctgaaagaaatgatggatggaaacagaattcttatatttgtggaaacaaagaaa
ggatgtgatcaagttacacgacaacttagaatggatggatggcctgcattatctatccat
ggtgataaaagccaagatgaaagggattgggtgttggctgagtttaaaagtggcaggagt
cttataatgacagccactgatgttgctgcccgtggtcttgatgtgaagggcataaagtgt
gtcatcaattatgatttcccaacaagccttgaagattatgttcataggataggacgaact
ggtcgtgcaggagccaaggggatcgccgttacgtttttcactcattcaaatgttaagcat
gctagagagcttgttaatatccttcaagaagccggtcaagccgttcctgttgcattatct
tctatgacccggtccatgggccctggagcaggttctggtgggagctttagatctagaggt
agaggaggtggggggcgaggtgcgatttcaggaactaatacggttccgcttggttccaaa
gctcattggtag
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