Bidens hawaiensis: 143590198
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Entry
143590198 CDS
T11418
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143590198
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
143590198
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix_3
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-GeneID:
143590198
NCBI-ProteinID:
XP_076926869
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDQHLLKAACICFIFSFFMSCNAASYNVVRYGARPDGRTDSSQAFERAWRAACASTSSTM
VYIPRGVFMTKPVVFSGPCRSRILFQIDGTIVAPPNYQDMGNSGFWILFTKVSRLTIHGG
TIDARGSKFWACRRTGSRCPPGVRSLSILWSSNVVVSGLKSLYSELIHVTVSDCNNIVFE
HLNIIAPSRSPNTDGLIIQSSSGVTIRNSLFRTGDDCIAVGPGSKNIWMEKIACGPGHGI
SIGSLGNSLNEAGVQNVTVTNAVFTKTQNGVRIKSWARDSKSYATNVEFRNIVMKAVDNP
IIIDQTYCPGDRCPRQTSGVEVSNVRYSNIKGTSTTVEAVKFECSVSNPCRGIQMRNIRL
TTPNRATTSTCENVHGRASGQLVPKSCL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacacctcctaaaagctgcatgcatttgcttcatattttcattctttatgtca
tgtaatgcagcttcttacaatgtggttagatatggagctagacccgatggtcgaaccgac
tcaagccaggcgtttgaaagggcgtggagggctgcatgcgcctcaacgagctcgaccatg
gtttacatccctcgtggcgtgttcatgactaaaccggtcgtgtttagtggaccgtgcagg
agccggatcttgtttcagattgatgggaccattgttgcaccaccaaattatcaggacatg
ggtaactcagggttctggatattgttcactaaggtttcgaggttaactatacatggtgga
accattgatgctaggggttcaaagttctgggcttgtcggaggactggtagtcgatgcccc
cctggagtaaggtcgttatcgatcttgtggtcgagcaatgtggtggttagcgggctcaag
tcgctatacagtgaactgattcatgttaccgtaagcgactgcaacaatatcgtgttcgaa
catttgaacattatagccccgagccgcagcccaaatacagatggtctcatcattcaatca
tcttctggtgttaccatcaggaacagtctttttaggaccggggacgactgcatcgcagtc
ggccctggttccaagaacatatggatggaaaaaatcgcttgcggcccgggccatggtatt
agcataggtagcttgggcaacagtttaaacgaagccggtgtgcaaaacgtgacagtgaca
aatgccgtttttacaaaaacacaaaatggagtgcggatcaagtcatgggcgcgagatagc
aagagctatgcaacaaatgtggagttcaggaacattgtaatgaaggcagtcgacaacccg
attatcattgatcagacttactgcccgggtgatcgatgcccacgtcagacatctggagtc
gaagtgagcaacgtgcgatatagcaacattaaagggacatcaacaacagtggaagcagtg
aagtttgagtgcagtgtaagtaatccgtgtagagggattcaaatgcgaaacattagacta
acgactccgaatcgagcaaccacctcgacttgtgaaaatgttcatggtagggcttcgggt
caactggtgcccaaaagctgcctttga
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