Bidens hawaiensis: 143591030
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Entry
143591030 CDS
T11418
Name
(RefSeq) protein PIR-like
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143591030
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
143591030
Factors involved in mRNA localization
Other mRNA localization factors
143591030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
143591030
NCBI-ProteinID:
XP_076927468
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MAAVPVEEAIAALSTFSLEDDQPEVQGPALWVSSERGATTSPIEYSDVHAYRLSLSEDTK
ALNQLNTLIQEGKEMVSVLYAYRSCVKALPQLPDSMKQSQADLYLETYKVLDLEMSRLRE
IQRWQASAASKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPND
FSWYKRTFTQVSIQWQDTDSMRDELDDLQIFLSTRWAILLNLHVEMFRTNNVEDILQVLI
VYATECLELDFALLFPERHVLLRVLPVLVVLATSSDKDSESLNKRVKMNRLIAIFKNDPV
IPAFPDLHLSPAAILKELSMYFPKFSAQTRLLSLPAPHELPPREVHDYQRHYLIINHIGA
IRAEHDDFTIRFASAMNQLALLKTIESADIEWSKEVKGCIYDMVVEGFQLLSRWSCRIWE
QCAWKFSRPCKDFVESGEMTSSVSDYEKVVRYNYSSDERKALVELVSYIKSIGSMMQRCD
TLVADALWETVHAEVQDFVQNTLAAMLRTTFRKKKDLCRILSDMRTLSADWMANTTKPES
ELQSSQHGSEENKGNFFFPRAVAPTAAQVHCLQFLIYEVVSGGNMRKPGGLFGNSSSDIP
VNDLKQLETFFYKLSFFLHILDYSVTVATLTDLGFLWFREFYLESSRVIQFPIDCSLPWM
LVDHVLDSQNGGLLESVLMPFDIYNDSAQHALVVLKQRFLYDEIEAEVDNCFDIFVSRLC
ESIFTHYKSWAASELLDPSFLFTLDNGEKFSVRPMRFTALLNMKRVKLLGRTINLRSLIA
ERMNKLFRENLEFLFDRFESQDLCAIVELEKLLEILQMTHDFLSRDLTIDSFSIMLSEMM
ENVSLVSYSSRLASQIWTEVQNDFLPNFILCNTTQRFVRSSKVPSAPVQKPSVPYAKPNF
YCGTPELNSAHQSFARLHSGFFGLPHMFSIVRLLGTRSLPWLIRALLDHISTKITTLEPM
ITGLQEVLPKSIGLLPFDGGVTGCMRLVKELLKWQSKTELKTEILHGIKEVGSALYWMGL
LDIVLREVDTTQFMQVASWLGLIPGTDGQILQSQEDGNTPVVTLYKSATAAIVSSNRVNP
APFYTMSKQAEAADLLYKANLNTGSVLEYALAFTSAALDKYCTKWSAAPKTGFIDITTSK
DFYRIFSGLQIEYLEDCMQAPPNNHEMLGDSVAWGGCTIIYLLGQQLHFELFDFSYQVLN
IAEVDSATTGPSNKSPHLSQGWELLLEAMKKARRLNNHVFSMLKARCPLEDKQACAIKQS
GAPLHQIKFENTVSAFETLPQKCS
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttcctgttgaagaagctatcgccgctctttctacattctccttggaggat
gatcaaccagaggttcaaggcccagcattgtgggtttcatcagaaagaggtgcaacaact
agtccaattgagtatagtgatgttcatgcatatcggttgtctttatcagaggacacaaaa
gcacttaatcagctgaatactcttatacaagaaggcaaggaaatggtgtcagtactctac
gcatacagaagctgtgttaaagcactacctcagcttccagattctatgaagcaaagtcaa
gctgatttgtatctagaaacttataaagtactggacttggaaatgagtcggcttcgtgag
atacaaagatggcaagcatcagctgcttctaaattagcagcagatatgcagcggttttca
aggcctgagagacgcattaatggccccactgtaactcatctttggtccatgttgaaatta
cttgatgttttggttcaacttgatcatcttaaaaatgcaaaagcaagtatacctaatgat
ttctcttggtataaaaggacatttactcaagtcagcattcagtggcaagacacggattca
atgagagatgagttagacgatctacagatttttttgagcacaagatgggccattttgttg
aacttgcatgttgaaatgtttcgtacaaacaatgtggaagatatccttcaagttctgatt
gtgtatgcaaccgagtgcctcgaattggattttgcacttcttttccctgaaagacatgtt
cttcttcgtgttcttcctgttcttgttgtcttagcaacatcttcagataaagatagcgag
tcactcaacaaaagggtcaagatgaacagactaattgctatttttaagaatgatccagtg
atacctgcattcccagatcttcatctttcaccagctgcaatattgaaggagctttctatg
tactttcctaaattctctgcacaaacacgtttgttaagtcttccggctcctcatgaactc
ccaccccgtgaagtgcatgattatcagagacactatttgatcataaatcacattggagca
attcgtgctgagcatgatgactttactatccgttttgcttctgctatgaaccagctggca
ttattgaagacgattgaaagtgcagatattgaatggtcaaaggaagtcaaagggtgtatt
tatgatatggttgttgaaggatttcagcttttaagccgatggagttgtcgcatttgggag
caatgtgcgtggaaattctcacgcccctgcaaggactttgttgagtcgggtgaaatgaca
tcatcagtttctgattatgaaaaggtggtacgctataattacagtagtgatgaaaggaaa
gctttagttgaacttgtgagctacataaaaagcattgggtcaatgatgcagaggtgtgac
acattagtagcagatgccttatgggaaactgttcatgctgaagttcaagattttgtacaa
aacacattagcagccatgttacgcactacattcagaaagaaaaaggacctttgcaggata
ctgtctgatatgcgaaccctttcagctgattggatggctaacactaccaaacctgaatct
gagttgcaaagttcacaacatggaagtgaagaaaacaaaggaaacttcttttttccaagg
gcagttgcaccaactgctgcacaggttcattgcttgcagtttttgatatatgaggtggta
tctggtggtaatatgaggaagccaggagggctgtttgggaatagtagctctgacattcct
gtaaatgatttgaaacaactggaaacctttttctacaagcttagttttttcttacatatt
ctagactattcagttactgttgcaacgttgacggatcttggtttcttatggtttagagaa
ttttatttggaatcttctcgtgtcattcagtttcctattgattgctctcttccttggatg
ttggtcgatcatgtattggattcacaaaatggtggtcttcttgaaagtgttttaatgcca
tttgacatatacaatgattctgctcaacatgcgcttgttgtgctcaagcaacggtttctc
tatgacgagattgaagctgaggtggataactgttttgatatatttgtgtcaagattgtgc
gagtctatttttacacattacaaaagttgggctgctagcgagcttcttgacccgtcattc
cttttcacactggataatggagaaaagttttctgttcgcccaatgagattcactgcccta
ctcaacatgaaacgggtcaagttacttggaaggacgatcaacttgaggagtttaattgct
gagaggatgaacaaattatttagagagaatcttgagtttttgtttgatcgttttgaatca
caggacttgtgtgctatagttgaactggaaaagctattggaaatcttacaaatgactcat
gatttcttgtcacgggatctcactatagattctttcagtattatgctaagtgagatgatg
gaaaacgtctctcttgtttcttactcaagtcgacttgcttctcagatttggacggaggtg
caaaatgattttttaccaaacttcatcctatgtaacacaactcaacgctttgttcgatca
tcaaaagtaccatctgctcctgtacagaaaccatcagttccatatgccaaaccaaacttc
tactgtggaactccagagttaaactcagcacaccaaagctttgctcgattacatagtggg
ttctttggtttacctcacatgttctccattgtacggcttctgggtaccagatcattgcca
tggcttattcgagccttactggatcatatttcaactaagataacaacccttgagccaatg
ataactggattgcaagaagtacttccaaagtctatcggtttgctcccatttgatggcggc
gtaacagggtgtatgaggcttgtgaaagaacttcttaagtggcaatccaaaaccgaactc
aaaactgagattttacatgggattaaggaagttggaagtgctctatattggatgggcctg
ctcgatatcgttttgagagaagttgacacaactcagttcatgcaagtagcctcatggtta
gggctaatacctggtaccgatggtcaaatcctacaatcacaagaagacggaaatacccct
gtagtcactctttataaatcagccactgctgctatcgtttcaagcaaccgtgtaaatcct
gcacccttttacacaatgtcaaaacaagcggaagctgctgatttattgtacaaggctaac
ttaaatactggaagtgtgcttgaatatgcacttgccttcacgagtgctgcacttgataaa
tactgcactaaatggagtgctgcaccgaagacgggttttattgatattacaacatcgaag
gatttttatcgaatttttagtggtcttcaaatagaatacttggaagattgtatgcaagca
cctccaaacaaccatgaaatgttgggggattccgtggcatggggcggttgcacaataatc
tacttgcttggtcaacaactccattttgagctctttgacttctcttatcaagttttgaat
atcgccgaagttgacagtgccacaaccggaccgtcaaataagagtcctcacttatctcag
ggatgggaattgctactagaagctatgaagaaagcgagacgtttgaacaatcacgtgttt
tcaatgttgaaggctcggtgccctcttgaagacaagcaagcgtgtgccattaagcaaagc
ggggcccctcttcaccaaatcaaatttgaaaacaccgtatctgcctttgaaacacttcca
caaaaatgttcttga
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