KEGG   Bidens hawaiensis: 143592461
Entry
143592461         CDS       T11418                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
bhw  Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bhw03009]
    143592461
Ribosome biogenesis [BR:bhw03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    143592461
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WDR55 EIF3I Beta-prop_EML Beta-prop_VPS8 Beta-prop_TEP1_2nd Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st WDR54 WD40_Gbeta ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IP5PC_F Beta-prop_ACSF4 Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_LRRK2 WD40_RFWD3 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_BBS7 GCN5L1
Other DBs
NCBI-GeneID: 143592461
NCBI-ProteinID: XP_076928488
LinkDB
Position
Unknown
AA seq 445 aa
MEDSEEVVIASSSSLEGGIGCWELRSGAEHLRYRACASPPHGLVSVAGRFLASSQIHHSS
GSVLFWSWNKPQVEVKSFPSEAIIPLACNSDGTYIVGGGLSGDIYFWEVATGRLLKKWHA
HYRAVTCLLFSMDQSLLISAAEDGSVRVWSLFMIFDEERQQRSGHLYEFSFSEHVLPVTD
IVTGYGGSNAILVSASQDRTCKVWSLARGTLLRNVVFPSVIDAVALDPGEHVFYAGGRDG
KIYIAELNSVGKTNNYGLHIIGTLSDQSKAICSLAFALDGVQLIAGSEDGFVRVWDTKTH
NIIRVFKHAKGPVNNILVIQQPPALYPRTVANNQGLMARKQASLPPPLEKFTSIDEHSDL
SIYIPPRHDYHRHCDEVYATVDSMNSQISELQRGSCGASEMEIERLKVEKERAMQMVQQW
KKMYENLHQFCVGELLNGEGEAAIL
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggaagactcagaagaagtagtgattgcctcttcgtcctccttagaaggcggaatcggt
tgctgggagcttcgttcgggcgcagagcacctccgttacagggcatgcgcgtctcctcct
cacggccttgtttccgtcgccggacgcttcctagcctcctctcagattcatcattcttct
ggttctgttctcttctggtcatggaacaagcctcaggtagaagtgaagagttttccttct
gaagcaatcattcctcttgcttgtaattctgacggcacttacatcgttggtggtggactc
tctggtgacatctacttctgggaggttgcaactggtaggctactcaagaaatggcacgct
cactatcgggctgttacctgcttgctcttttctatggatcagtcacttttgatttctgct
gctgaagatggatccgttcgagtctggtcactttttatgatctttgacgaggaaagacag
cagagatcagggcatctttacgagtttagtttctctgagcacgtgctgccggtaaccgat
attgttacaggctatggtggatctaatgcaattctagtgtcggcttcacaggatcgtact
tgcaaggtatggagtcttgctagaggaactttgttgagaaatgttgtgtttccttcagtt
attgatgcggttgcattggatcctggagagcatgttttttatgctggtggtagagatggt
aaaatatacattgcagagttgaattctgttggcaaaactaacaactatgggttgcatatt
attggtacgttgtctgatcaaagtaaggctatatgttctttggctttcgcactggatgga
gttcaattgattgctggatcagaggacgggtttgttagagtctgggacactaaaactcat
aatataatacgcgtttttaagcatgcaaaaggtcctgttaacaatattcttgttattcaa
caaccaccggctctataccctcgaacagtagcaaataatcaaggtttaatggcgagaaaa
caggcgtcactgccaccaccgcttgaaaagttcacatcaatagatgaacactcggatctt
agcatatatattccacctcggcatgattatcacaggcattgtgatgaggtctatgccact
gttgactccatgaatagtcagattagtgaacttcagcgcggttcttgtggagcttctgaa
atggaaatagagagattgaaagtagaaaaggaaagggcgatgcaaatggtacaacagtgg
aagaagatgtatgaaaatctgcatcagttttgtgtcggtgagcttttgaacggagaagga
gaagccgcaatactttga

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