Bidens hawaiensis: 143598832
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Entry
143598832 CDS
T11418
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bhw Bidens hawaiensis
Pathway
bhw04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
143598832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bhw04040
]
143598832
Ion channels [BR:
bhw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
143598832
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
143598832
NCBI-ProteinID:
XP_076933060
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MFDYHASKSQYVGGHREKFARLDDLDSRLSSPASGVAMNKCGFEGITRSSRAHATPSRSF
KNGIRKGSEGLKSIGRTLGFGAVFPEDLKASEKKILDPQDKFLLTWNKYFVVSCILVVSI
DPLFFYLPVFDETKTCLGIDRKLAITATTLRTVVDAFYLIHMAFQFRTAYIAPSSRVFGR
GELVIDSAQIAQRYLRWYFIIDFLAVVPLPQIVVWRYLQRSKGSDVLATKQALLVIVLLQ
YVPRFARIVPLTSELKRTAGVIAETAWAGAAYYLLLYMLASHIVGAFWYLLSVERNDTCW
QRACKGICNKDFLYCGNNHMDGYDKWSNVSSSVLTAACTTDGDNPPFDFGIFEQALSSGI
VSSTKFVSKYCYCLWWGLQNLSTLGQGLETSTYPGESIFSIALAIFGLILFALLIGNMQT
YLQSLTIRLEEMRIKRRDSEQWMHHRLLPHDLRERVRKYDQYKWLETRGVDEENLVQNLP
KDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLKPCLFTNNTYIVREGDLVDEMLF
IIRGRLESATTDGGRSGFFNSGFLKEGDFCGEELLTWALDPKTGSNLPSSTRTVKALREV
EAFALPADELKFVAGQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKILEQR
RKEEEGAELAAGKNNGSGSYSIGAAFLASKFAANALRGVHRNRNLKSARELMKLQKPPEP
DFTADAD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattatcatgcatcaaagtcccaatatgttggtggccaccgggagaagtttgca
aggttggacgatttggattctagattatcatcacccgcttctggcgtcgcaatgaacaaa
tgtggattcgagggaataactcgttcaagccgcgcacatgctaccccttctagatcattc
aaaaacggaataagaaaagggtcagaaggacttaaatccatcggtagaacactcgggttt
ggggccgtttttcccgaagacctaaaagcctcagaaaagaaaatcttggacccacaagat
aaatttctactcacatggaataagtactttgttgtctcgtgtattctggttgtatccata
gatccactctttttctatcttccggtttttgatgaaacaaaaacatgtctcggtattgac
cggaagttagctattacagccacgactttaaggacggttgttgatgcgttttatcttatt
catatggcgtttcagtttagaactgcttatattgctccatcatctagagtttttggacgg
ggtgaacttgtgattgattctgcacaaattgctcaaagatatcttcggtggtattttatc
attgatttccttgctgtggtgccactgcctcagattgttgtttggcgatatctgcagagg
tctaaaggttcagatgtattggctacaaaacaagccttacttgttattgttttacttcag
tatgttccaaggtttgcccgaattgtccctttgacatcggagcttaaaagaactgctggt
gtaattgctgaaactgcatgggctggagctgcttattatttgttgctatacatgcttgcc
agtcatatagtcggggccttctggtatttattgtccgtagaacgcaatgatacatgctgg
caaagagcttgtaaaggcatttgtaacaaagatttcttgtactgtggaaataaccacatg
gatggttatgataaatggagcaatgtcagtagctcggttttaaccgcagcttgtaccaca
gatggtgataacccgccatttgattttgggattttcgagcaggctctttcatcagggatc
gtgtcatcaactaagtttgtttctaagtactgctactgcctgtggtggggactacagaat
ttgagcacgttagggcaggggcttgaaaccagcacttatcctggagagtctatattttcc
attgctctagccatttttggtctcatcctctttgctcttttaattggaaacatgcagaca
tatcttcaatcacttaccatacgacttgaagaaatgagaatcaaaagacgggattctgaa
caatggatgcatcaccggctacttccgcatgatttgagagagcgtgtgagaaaatatgat
caatacaaatggttggaaacacgtggagttgatgaggaaaatttggttcaaaatcttcct
aaggatcttagaagagacattaaacgtcatctttgtcttggtttggtcaaaagggtcccc
ttatttgaaaacatggatgaacggttgctcgacgcgatttgcgaacgtttaaagccgtgt
ttattcacaaacaacacttacatcgtacgtgaaggcgatctggtcgatgaaatgcttttc
atcatacgcggtcgtctcgagagtgcaacaactgacggcgggagaagcgggtttttcaac
agtgggtttctaaaagaaggcgacttttgcggtgaggagctgttaacatgggccctcgac
cctaaaacagggtctaacctcccgtcgtccactagaaccgtaaaggcgctaagagaagtg
gaagcgttcgcgttaccagccgatgaacttaagttcgttgcgggccagttcaggcggctt
cacagtcggcaggtgcaacacacgtttcggttttactcgcagcagtggcggacttgggcg
gcatgctttattcaggcggcctggcgaaggtattcaaaacggaagattctagagcagagg
aggaaggaagaggagggggcagagttagccgccggtaagaacaatggaagtggttcgtac
agcatcggggctgcctttttggcttctaaattcgctgcaaacgctcttcgtggggtccac
cggaaccgaaatttgaagagtgctagagagttgatgaagttacagaagccaccggaaccg
gattttactgctgatgctgattag
DBGET
integrated database retrieval system
