Bidens hawaiensis: 143601120
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Entry
143601120 CDS
T11418
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
bhw Bidens hawaiensis
Pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143601120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143601120
Spliceosome [BR:
bhw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
143601120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
143601120
NCBI-ProteinID:
XP_076934725
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MEIPIKPIDQLLERVLCMNILSSDYFKELYRFKTYHEVIDEIYNQVDHVEPWMTGNCRGP
STAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAAEPKTLWGWFEPYVKDD
EEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRSITANLEKLKLPTKHCGVT
GESTRGSDDMARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPLPSYDRKDGDDSK
RSPSRHRSQSRDLSDRDYTDRDRRDRDREHGRDRDRDHGRDRDRDSRDRYRDRRHDYDRR
HRETSRRDYHRESSSRRSRSRSRSRSRCRSRSQSVCVDYKPSPNREETKDRTSASSNLAK
LKDMYGELSTDKGSGPRGGGAIGRDNNGGEEVIRLGGSSWR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggagatacctattaagccgattgatcagcttttggagagggttctttgcatgaatatc
ctttcatcggactactttaaagagctttatcgtttcaaaacttatcatgaagtgattgat
gagatatacaatcaagtagatcatgtggagccgtggatgactgggaattgtcgtgggcct
tcaaccgccttttgtcttttgtacaagtttttcaccatgaaacttactgtgaaacaaatg
catggcctgttgaagcacccggattctccatacataagagcggttggatttctatactta
agatatgctgcagaacccaaaactctgtggggctggtttgaaccatatgttaaggatgat
gaggagttctcgcctggatccaatggaaggatgacaacaatgggtgtatatgtgcgggac
ttacttcttggccagtactactttgatacactctttcctcgcattcccgtccccgtaatg
cggtcaataacagcaaaccttgaaaaactcaaactcccaaccaaacattgtggagtaaca
ggggaatccacccgtggatccgatgacatggcccgtcgaccgccatctgtcaaagcagca
ctttcagtttctttcggtcagcgggcccctcaccgtgcatccactcgagactcctcacct
gttcgccgcactctcccgccactcccttcctatgaccggaaagacggtgacgattccaaa
agatccccttcccgccaccgtagccaaagccgtgatttatccgatcgggattacaccgat
cgagatagaagggaccgggatcgagaacatggacgggaccgggaccgtgatcatggacgt
gacagagatagagatagtagagacagatatagagacaggagacatgattatgatcgcagg
cacagggaaacaagccgtagagactaccacagggaatctagttctcgaagaagccgaagc
aggagtagaagcaggagccggtgtcgtagccgaagccagagcgtgtgtgtggattataaa
ccgagtccaaaccgagaagaaacaaaagatagaacatctgcatctagtaacttggctaag
cttaaagacatgtatggcgaattgtctactgataagggtagcggtccaagaggcggtggt
gctattggtagggataataatggtggtgaagaggtcattcggctcggtggttcttcttgg
aggtaa
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