Bidens hawaiensis: 143601316
Help
Entry
143601316 CDS
T11418
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
bhw Bidens hawaiensis
Pathway
bhw03015
mRNA surveillance pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143601316
09123 Folding, sorting and degradation
03018 RNA degradation
143601316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143601316
03041 Spliceosome [BR:
bhw03041
]
143601316
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
143601316
mRNA cycle factors
Stress granule specific factors
143601316
Spliceosome [BR:
bhw03041
]
Complex C
Other components
Complex C specific factors
143601316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_Nup35
RRM_3
RRM_7
RRM_MARF1
RBD_DGKtheta
PH_35
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
143601316
NCBI-ProteinID:
XP_076934878
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MAAQVQPQAVSGGGGQQFVPTSLYVGDLEWNVTDSQLYDLFNQLGQVVSVRVCRDLSTRR
SLGYGYVNYANPQDAARAMEVLNFTPLNGKPIRIMYSHRDPSVRKNSSGNIFIKNLDKAI
DQKALHDTFSTFGNILSCKIATDSIGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVY
VGPFLRKQEREMAVDKTKFTNIYVKNLSESTTDEDLNKIFSEYGTVTSAVVMKDADGNSK
CFGFVNFESVDDAAKAVDALNGQKFDNKEWYVGKAQKKHEREQELKQKFEQSMKEAVDKS
QGLNLYIKNLDVTIDDENLKELFSSFGTITSYKVMRDPIGASKGSGFVAFSTPEEASRAL
FEMNGEMVASKPLYVALAQRKEDRRARLQAQFSQMRPIAMAPTVAPRMPMYPPGGPGLGQ
QIFYGQQPTFIPPQPGFGYQQQLVPGMRPGGAPIPNFFMPMVQQGQQGQRPGGRRATGPG
QQNQQPLPLMHQQMMPRGRVYRYPPGPNAAEPSMSGGIGGAPYDMGGVIPSPIPQPIPIG
ALASALANASPSEQRTMLGENLYPLVEQLEAESAAKVTGMLLEMDQTEVLHLLESPDALK
AKVAEAKEVLRNVAQQAAAGGAANQLVGLSLE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggttcaacctcaggcggtgagtggtggtggtggtcagcagtttgtgccg
acttcgttgtatgttggtgatctggagtggaatgtgacggactcccagctttatgatctc
tttaaccagttaggccaggtggtttcagttagggtgtgtcgggatttgtcgactcggcgg
tcgcttgggtatggttacgttaactatgcgaatccgcaagacgctgcaagggcaatggag
gtgctgaacttcactcctctgaatggcaagccaataagaataatgtattcccatcgagat
cctagtgtacgcaaaaatagttctggaaacatatttatcaagaatttggataaggcgatc
gaccagaaggcactacatgacaccttttctacatttggaaacattctctcatgcaagata
gctacagattcaattggtcaatcaaagggctacggttttgtgcagtatgacagtgaagag
gccgcacaaaaagctattgaaaagctcaatggcatgcttctaaatgacaagcaagtgtac
gtgggtccctttttgcgcaagcaagaaagagaaatggctgttgacaagacaaagttcacc
aatatctatgtcaaaaacttgtcggagtcaacaacagatgaggatttgaacaagatattt
agtgaatatggaactgtcacaagtgctgttgtgatgaaagatgctgatgggaactccaaa
tgttttggatttgttaattttgagagtgttgatgatgctgctaaagcggttgatgcttta
aatggtcaaaagtttgataataaagaatggtatgttggaaaagcacagaaaaaacatgag
agggaacaagaactaaaacaaaaatttgagcagagtatgaaggaggcggttgataaatca
caagggctaaatctgtacataaagaatttagatgtcacgattgatgatgaaaacttgaag
gaattgttttcttctttcggcactataacttcatacaaggttatgcgagatcctattgga
gcaagcaaaggatcaggttttgttgcattttcaactcctgaagaagcttctagagcactt
tttgagatgaatggagagatggttgctagcaagcctctttatgttgcacttgcacaacgc
aaggaagataggagggcaaggctgcaggcacaattttcacagatgcgtccaattgctatg
gcacctactgtagcacctcggatgccaatgtacccccctggcggtccaggtcttggccaa
caaatattctacggtcaacagcctacattcattcctccccaacctggatttgggtaccag
cagcaacttgtcccaggtatgagacccggcggggctccaatccccaacttctttatgcca
atggttcagcaaggtcaacaaggtcagcgtccaggtggcaggcgtgctactggtcctggc
caacaaaaccagcagcctcttccgcttatgcatcagcagatgatgccacgtgggagggtg
taccggtatcccccaggaccaaatgcagctgaaccttcgatgagtggtggtattggaggg
gctccatatgacatgggtggagtcattccatctccaatcccacaaccaattcctattggt
gctttagcttctgcacttgcaaatgcttccccgtctgagcagaggacgatgttgggagaa
aatctataccctctagtggaacagctggaggccgagtcagcagcgaaggtaacagggatg
cttctagaaatggatcaaaccgaagttcttcacttgctggaatcccctgatgctctcaaa
gcgaaggttgcagaggcgaaagaggtgttgaggaatgttgctcagcaggcggcagctggt
ggtgccgccaatcagttggtgggcctctcgttagagtaa
DBGET
integrated database retrieval system
