Bidens hawaiensis: 143602451
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Entry
143602451 CDS
T11418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143602451
03009 Ribosome biogenesis [BR:
bhw03009
]
143602451
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143602451
Spliceosome [BR:
bhw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
143602451
Ribosome biogenesis [BR:
bhw03009
]
Eukaryotic type
90S particles
Helicases
143602451
Pre-60S particles
143602451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
CMS1
Motif
Other DBs
NCBI-GeneID:
143602451
NCBI-ProteinID:
XP_076935663
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MLLKAAASPPALPVNWGLKLNKSSAFLSLNNNNNNKKKKKGSCEVGGKRGYRKRPLETAG
AYELVDQEEEEEETPIPIPIPIPSKHVLQWKPPPSIHNNNNNNNNSTKETKTHTTHAINT
PTAISKGVSRSFERLRAGRVRDLGRVSSSEKVLKDVDSCTRPNLSVQNRSNALKDDDTEV
VGISSKLRKSNAASDFYSRKSFKDVGCTDYMLQFLNSQLIAYPSHIQAMSFPHVINGKSC
IIADQSGSGKTLAYLLPVIQIIRQDELEGLDKSLPQSPRVVILVPTAELASQVLRNCRLM
SKSGVPFRSMIATGGFKQKTQLESLRNELDVLIATPGRFLYLVQEGFLQLTNLKCAVLDE
VDILFKDGDFQPALESLMNLSPVTTQYLFVTATLPVLVYNKLVENFPDCEVIMGPGMHRT
SSGLEEILVDCSGDDGMEKTQDTAFFNKKSALLKLVEEGPVTKTIIFCNKIETCRKVENV
LTRLNRKALPFHAALAQDLRVANMEEFCQTRLKDCSLFLVCTDRASRGIDIPGVDQVVLF
DFPRDPSEYVRRVGRTARGAGGKGRAFIFVVGKQVSLARRIIERNRKGHPLHDVPSN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgaaagcagcagcatctccaccggcactacctgtaaattggggattgaaattg
aataagtcgtcagcatttttgtctttgaataataataataataataagaagaagaagaag
ggatcatgtgaagttgggggtaaaagaggatataggaagaggccactggaaacagcagga
gcgtatgagcttgtagaccaagaagaagaagaagaagaaacccctatccctatccctatc
cctattccttccaaacatgttcttcaatggaaacctcctccttccatccataataataat
aataataataataattctaccaaagaaacaaaaacgcacaccacccatgcaattaacacg
cctacagcaattagcaagggggtgtctcgaagttttgaacgattgagagccggtagggtg
agggatcttggtagagtatcttcttcagagaaggtcctaaaggatgttgactcgtgcact
cgaccaaacctttcagtacaaaatagatcaaatgctttaaaagatgatgacacagaagtt
gtaggtatatcaagtaaattaaggaaatcaaatgctgctagtgatttttatagcagaaaa
tcatttaaagatgttggttgcaccgattacatgcttcagtttttgaacagtcagcttatt
gcatacccttcacatattcaggctatgtcatttccacatgttattaatggaaagagttgc
atcatagctgatcagagcgggtctggtaaaactctggcttatcttttacctgtaattcaa
attattagacaagatgagctggaaggacttgacaaatccttacctcaaagccctcgagtt
gtcattctagtcccaactgctgagctggcttctcaggtattgcgtaattgcaggctgatg
tcaaagtctggtgtgccattccgatcaatgattgcaacaggtggttttaaacagaaaaca
caattggaaagtcttagaaacgagttggacgttttaattgctactcctggtcgattctta
tacttggttcaagaaggctttttacagttgaccaatcttaaatgtgcggtgttggatgag
gtggacatactttttaaggatggagattttcaaccagcattggagagcttaatgaacttg
tcacctgttaccactcaatatctttttgtgactgcaactctaccggtgttggtatacaac
aagcttgttgaaaattttcccgattgtgaagttatcatgggacctggcatgcaccgtaca
agctctggtcttgaggagatacttgttgattgcagtggagatgatggaatggaaaaaact
caggatactgcgtttttcaacaagaaatctgctctccttaaactagtagaagaaggtccc
gttacgaaaacgatcattttctgcaataaaatagagacttgccgaaaggttgaaaatgta
ttaacaaggctcaatagaaaagctttgccatttcatgctgctttagcgcaagatttgcgt
gttgccaatatggaggagttctgtcagacgcggttgaaagattgttctttgtttttagta
tgcactgacagggcatcccgagggattgatatcccaggagttgaccaggtggtgctgttt
gacttcccccgtgacccaagtgaatacgtgcgtcgtgttggaagaacagcccggggcgct
ggaggcaaaggtagagctttcatatttgtggttggaaagcaagtctctcttgctcgaaga
attatagaaaggaatagaaaaggccatcctttgcatgatgttccatcaaattaa
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