KEGG   Bidens hawaiensis: 143603880
Entry
143603880         CDS       T11418                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bhw  Bidens hawaiensis
Pathway
bhw03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    143603880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bhw03021]
    143603880
   03036 Chromosome and associated proteins [BR:bhw03036]
    143603880
Transcription machinery [BR:bhw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     143603880
   Coactivators
    SAGA/TFTC/STAGA complex
     143603880
Chromosome and associated proteins [BR:bhw03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     143603880
    STAGA complex
     143603880
    TFTC complex
     143603880
    SAGA complex
     143603880
    SLIK complex
     143603880
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 TFIID_NTD2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT122_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F LisH PALB2_WD40 Beta-prop_IFT122_2nd LisH_TPL
Other DBs
NCBI-GeneID: 143603880
NCBI-ProteinID: XP_076936662
LinkDB
Position
Unknown
AA seq 667 aa
MEDELDKIVFQYLKKKGFTQTEQILQQEKQNKNNKNANDASDSDLTKQILTFSESENIPA
MYHDGYSKLRSWTYSSLDEYKHELLRVLYPVFIHCFMDLIAKSHLQEARAFFDTFREDHE
MMHSRDLKKLAGVLCPSHLDEMEFAHTLRQSKVNIKICQYSYELLLQYLHNTKSITMLGI
INEHINFQVSPGQPSSISDDAEAFSLVGSGQDAANLINQKEIHWGLLEDTIEDRLDKAGG
LLSDSEKTEGDAKEGELDENKKKSAEGGKQGGPLKKLKKDKVGAAAVKGAKGEGDKSAAA
PRVKPELTLPTIPTDVENSILEDLRNRVQLSNTTLPSVCFYTFINTHNGLNCSSISHDGS
LVVGGFSDSSLKVWDVAKLGRMGSSMLQSENDSGLNENTLGSNGGKRAYTLYQGHSGPVY
SASFSPWGDFLLSSSSDSTVRLWSTKFNANIVCYKGHNYPVWDVQFSPLGHYFASASHDR
TARIWSMDRVQPLRILAGHLSDVDCVQWHVNCNYVATGSSDKTIRMWDVSSGNCMRIFIG
HRSSILCLAMSHDGRYLASGDEDGTIMMWDVSSGRCITPLMGHTSCVWSLAFSCEGSLLA
SGSADSSVKLWDVNTSVKPPKSEDTKNGNTNRLRSVKTLHTKSTPVYSLRFSRRNLLFAS
GALSANL
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggaagacgagttagataaaattgtatttcagtatttgaagaaaaagggatttacacaa
actgagcagattttacaacaagaaaaacagaacaagaacaacaagaatgccaatgatgct
tcagactcggatcttactaaacaaatcctcacattctctgagtctgaaaatatccctgca
atgtaccacgatggatatagcaagttgagatcgtggacttatagttcactagatgaatac
aagcatgaattgcttcgtgttctctatccagtatttattcattgcttcatggatctcata
gcaaaaagtcatcttcaagaagcccgagcatttttcgataccttccgtgaggatcatgag
atgatgcattcacgtgatctcaaaaagttagccggtgttctttgtccgtctcatctggat
gagatggagtttgctcatactttaaggcagagcaaagtgaatataaagatatgtcagtat
tcttatgagcttcttctgcaatatctacacaacactaagtcgattacaatgcttggtatt
atcaatgagcacataaactttcaagtttctcctggacaacctagctcaatttctgatgat
gctgaagccttttcacttgttggaagtggtcaagatgctgctaacctaataaatcagaaa
gaaatacattgggggttgcttgaagatacaatagaagatcggcttgataaagcaggcggt
ttgctctcagattcagaaaagacagaaggtgatgctaaagaaggggagttggatgaaaat
aagaaaaaatcagcagagggtggaaagcaaggtgggcccctcaagaagttaaagaaagac
aaggttggtgctgcagctgtgaaaggtgctaaaggggagggtgacaagtcagcagctgct
ccacgtgtcaaaccagagcttactttgcccacaataccaacagacgttgagaattctata
cttgaagaccttcgtaaccgtgtacaattgagcaatacaacacttccatcagtttgtttc
tacacatttattaacacacataatggattaaattgttcatcaatatcccatgatggatca
ttggttgttggtggattctcagattcatcactcaaggtgtgggatgttgcaaaacttggg
cgcatgggcagttctatgcttcagagtgaaaatgattcgggcctgaatgaaaacacactt
ggttcaaatggtggaaaaagagcttacacattgtatcagggccattctggacctgtttat
tcagcttcatttagtccttggggagattttcttctttcatcttcttcagattcaacagta
cgattgtggagcacaaagttcaatgcaaacattgtttgctacaagggtcacaattatcct
gtttgggatgttcagtttagtccacttgggcattattttgcgagtgcatctcatgacaga
accgcaagaatttggtcaatggatagagtacagcctttaaggatattagcaggacatcta
tctgatgttgattgtgtacaatggcatgtgaactgcaattacgtcgcgactggatcgagt
gacaaaacaattcgcatgtgggacgtatcatcgggaaactgcatgcggattttcattggt
cataggagttcaatcttatgtttggccatgtcacatgatggtagatatttggcgtctggt
gatgaagatggtaccataatgatgtgggatgtttctagtggtcgttgtatcactcccctt
atgggccatacatcctgtgtttggtcccttgctttcagctgtgaaggatcactccttgca
tctggttctgctgattcatctgtcaaattatgggatgtaaacacaagtgtaaaaccgcca
aaatctgaagacactaaaaatggaaatacaaacagactcagatcagtgaagactctgcat
accaaatctactccagtttattctttaaggttttcgcgaaggaatctactatttgcttcc
ggggctctttcagcaaatctgtaa

DBGET integrated database retrieval system