Bidens hawaiensis: 143607335
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Entry
143607335 CDS
T11418
Name
(RefSeq) putative pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143607335
Enzymes [BR:
bhw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
143607335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
143607335
NCBI-ProteinID:
XP_076938932
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MGHKRTCIVVLYTLLVQVYVAQEACASMVFQNVTTLPGQHPSPHIVVEDLQRRVNMSITR
REMLSYAADDSSTSCLTGNPIDDCWRCDPNWHLNRQRLADCGIGFGQYALGGKGGRYYVV
TDSSDNDAVNPKPGTLRYAVIQTEPLWIVFPTNMHIQLSEELIFNSFKTLDGRGANVHIT
GGGCITIQYITNVIIHNIHIHHCYQSGNMNIRSSPTHYGYRTKSDGDGISVFGSRDIWID
HCSLSHCKDGLIDVIMGSTGITISNNLFSHHDEVMLLGHSDNYLPDSGMQVTIAFNHFGE
KLVQRMPRCRRGYIHVVNNVYSRWEMYAIGGSGNPTINSQGNRYTAPANPNAKEVTKRVE
TAENHWKGWNWRSEGDILVNGAFFVVSGEGLELKYEKAYSVEPKSAALIDQLTMNAGVLG
SRSNKLGKWTDADGNVEGGVDDSENDYGEDSDGSSRPNSMALTSSFLFVLLSFLLCSSGD
QIVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggggcacaaaagaacctgcattgtagtgttgtacactctgctagtacaagtgtacgtt
gctcaagaagcttgtgcatcaatggtgttccagaatgtaacaacacttcctggccaacac
ccttcacctcacattgttgttgaagatcttcaaaggagggtaaatatgtcaattacgaga
cgagaaatgctatcctacgccgcggatgactcgtcaacttcatgtttgactggcaaccca
attgatgactgctggcgttgtgatcccaactggcatctcaaccgccagcgtctcgccgat
tgcggcattggcttcggccagtacgcactcggcgggaaagggggccggtactacgttgtt
actgactcctcagataacgacgcagtcaaccccaaaccaggcacccttcggtacgcggtc
atccaaaccgaaccactctggatagtcttcccaaccaacatgcatatccaactctcagaa
gaactcattttcaacagctttaaaaccctagacggccgcggcgccaacgtgcacataacc
ggaggcgggtgcattaccatacaatacattaccaatgtcattattcataatattcacatt
caccattgctaccaatccggtaacatgaatattcggtctagtccaacacattatggatac
cgaacaaaatccgatggagatgggatatccgtgttcggttcacgtgacatttggatcgat
cattgctcgttgtcacattgtaaagacgggttgatcgacgtgatcatggggtctactggg
attactatttcgaataacttattttcgcatcatgacgaggtgatgttgcttggtcatagt
gataattacttgccggattcgggtatgcaagtgactattgcttttaaccattttggtgaa
aagttggtgcaacggatgcctaggtgccggagagggtatatacatgttgtgaataatgtg
tattcgaggtgggagatgtatgcgattggcgggagtgggaatccgaccattaatagtcag
gggaaccggtatactgctcccgcgaatcctaatgcgaaagaggttacaaagagagtggag
acagcggagaatcattggaagggttggaattggaggagtgaaggggatattctagtgaat
ggagctttctttgtggtgtccggcgaagggttagagcttaaatacgagaaagcctatagt
gttgagcctaagtctgcggcattgatcgaccaactcaccatgaatgccggcgtgcttggt
agcaggagtaataagcttggaaaatggacagatgctgatggtaatgttgaaggaggtgtg
gatgatagcgaaaacgactatggtgaagatagtgatgggtcgtctaggccgaattctatg
gctttgacgtcgtcctttttatttgtgttgctatcgttcttgttgtgctcttcgggcgat
caaattgtgttattgtga
DBGET
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