Bidens hawaiensis: 143608499
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Entry
143608499 CDS
T11418
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhw04131
]
143608499
Membrane trafficking [BR:
bhw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
143608499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
DUF6119
Motif
Other DBs
NCBI-GeneID:
143608499
NCBI-ProteinID:
XP_076939631
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MAANSSPFMVDETDEDFFDKLVDDDDDDDDYKPVALSSKPEMLNDSDDAKAFANLSIGAD
ALEDLGEAPNEESVDQSRLVDSDSFAVDSATEEFGNGTDKPVDSLDNQVRESGGTAGVKE
VQWSSFGADAGFFDEFGNGSIDHIGKEDGFVSSESNGVVSSSLQGEDANQYSHQFQSDQV
YAATGEQATDGQDPNSSQYWENLYPGWRYDANTGQWYQVDESYNATSCAEGANSVASASE
WNVTDQKSEVSYLQQSAQSVAGTVAEKGATESVTSWDSVSQPGQNNLEDNNNNKVYPSHM
VFDPQYPGWYYDMNAQEWRSLDDYNSQPTAVAQDPVNRNGFGSSNTYYENDQKTYSEQEQ
DYNWNGSTMWQPNLAAPVDDFRNNQQIGNHYGNNFHVDNNAGTTSTNTTQVDNGFPAVSW
SQSTVPYSQPFSQPLQQSETVNVQKAHGNPNQLSYLQQPVQSSHQVSYGSTKGRSSAGRP
PHALVTFGFGGKLIVMKESTSLINASFGGQGSSSGSISVLNLAEVATGGADVHDYFHNLC
QQPCPGPLSGGNAGSKELNKWIDDRITHSQTSDVDYNKGEALRLLFSLLKIALQHYGKLR
SPLGSDTSLKENDAPEVAVARLFASVKGGAEYNNYGAFAHCLQHVPSEMQTRETAAEVQT
LLVSGRKKEALLRAQEGHWWGPALVLAAQLGDQFYVETIKKMALGQFVPGSPLRTLCLLI
AGQPADVFAADATTNGGAVNMFQQQPTQGQLSANGMLDDWEDNLAVITANRTKDDELVLI
HLGDCLWKERSNIIAAHICYLVAEANFEPYSDTARLCLIGADHWKHPRTYASPEAIQRTE
VYEYSKMLGNSQFTLLPFQPYKLVYAHMLAEVGRLSDSLKYCQAVTKSLKTGRIPEVEIW
RQLVISLEERIKAHQQGGFSANLVAPGKIVGKLLNLIDSTAHRVVGGLPPPVPSTYGGTA
QHDYHQQPHMGPKVLASQSAMTMSSLVPSESMEPINQADGNSRNMIHNRSASEPAFVRSP
MQDDTMKENSADSQSKSSGKTLGRRGFGFRAMLYEKTVGRILPSRQDKQAKLGDTNKFYY
DEKLKRWVEEGVDPPAQEAALAPPPTIATFQNGSPDYSLKTALSTESLSSEFASSAPASN
PSGIPLIPPTTNHFSARGRTGVRARYVDTFNKGGGNQTNLFQSPAVPTINRPNPNPNFFV
PTASPAAPEQPADNHPDNQTPPLLSSTTSQSATSIQKFASMNDMPKAGSSSSSLSLSTST
SSVTNHSMSRRTSSWSGGADQEFSVPGGNTFMPNKTNFAQSSNDDLQEVEL
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaattcttctccgtttatggtggatgaaaccgatgaggacttttttgataag
ttagttgatgacgacgacgacgacgacgattataagcccgttgcattatcttccaaaccc
gagatgcttaatgattccgatgatgctaaagcttttgctaatttgagcatcggtgctgat
gcgcttgaagatttgggggaagcgccaaatgaagaatctgtagatcaaagtcgtctggtg
gattcggattcgttcgcggtggatagtgctactgaagaatttgggaatggtacggataaa
ccggtggattccttggataatcaggttcgtgaatcgggaggcactgctggtgttaaagag
gtgcaatggagttcgtttggagcggatgctggtttctttgatgaatttggaaatggttcg
attgaccacatagggaaagaggatggttttgttagtagtgaatcgaacggtgtagtgagt
agttccttgcagggtgaggatgctaatcagtactcacatcagtttcaatccgatcaggtg
tatgccgctacaggggagcaagcaacggacggtcaggaccctaatagtagtcaatactgg
gagaatctttatcctggatggaggtatgatgcgaatactggacaatggtatcaagttgat
gaaagttataatgccacatcatgtgcagaaggtgcaaatagcgtagcttctgcttctgaa
tggaatgtcactgatcagaaatcggaggtttcttacttgcagcaatctgcccaatctgtt
gcgggaactgtagcagagaagggtgcaacagaaagtgttacaagttgggattcggtttct
caacctggtcagaataatttagaagataataataataacaaagtgtatccgtctcatatg
gtttttgatcctcaatatcctggttggtattatgatatgaatgcccaagaatggcgatct
ttggatgattataattcacaaccaaccgctgtagctcaggaccccgtcaaccgaaatggg
tttggttcaagtaatacgtattatgaaaatgatcagaaaacatatagtgagcaagaacaa
gattataattggaatggttcaactatgtggcaacctaatcttgctgccccagtggacgac
tttagaaacaaccaacaaataggtaatcattatggtaacaatttccatgtagataataat
gcgggaacaaccagcaccaataccacccaggttgataacgggttccctgcagtttcttgg
tctcaatcgactgttccttacagtcagccattcagtcagcctttgcagcaaagtgagacc
gtgaatgtccaaaaggcgcatggaaacccgaaccagttaagctatttgcagcaaccggtt
cagagcagccatcaagtgtcttatggttctactaaaggaaggtcgtctgctggccgccct
ccgcatgcattggttacttttggttttggtgggaaactgattgtgatgaaagaaagcacc
tctctcataaatgcatcctttggaggacagggttcaagttcagggtcaatatctgttctt
aacttagcagaagttgctactggaggagcagatgtacatgactattttcacaatctctgt
cagcaaccgtgtcccggtccactttctggtggaaatgctgggagtaaagagttgaacaaa
tggattgatgatagaattacacactctcaaacttctgatgtagattataacaaaggtgaa
gctctaagattgctcttttcgttgctgaaaatagccttacagcattacgggaaattgaga
tctcctttgggttcagacactagcttgaaggaaaatgatgctccagaagtagctgttgct
aggctatttgcatctgtgaagggcggtgcggaatacaacaattatggtgcttttgctcat
tgcttgcaacatgtaccttcagaaatgcaaactcgggaaactgctgccgaagtccaaact
ctgcttgtttctggtagaaagaaagaggctcttcttcgtgcacaagaggggcactggtgg
gggcctgcacttgttcttgcagcacaacttggtgatcagttttatgtagagacgattaag
aaaatggctcttggtcagtttgtaccaggatcaccattgcggacattatgtttgctgatt
gctggtcaaccagcagatgtatttgcagccgatgctacaacaaatggtggtgcggtaaat
atgttccaacaacagcctacacagggtcaacttagtgctaatggtatgcttgatgactgg
gaggataatttggcagtaattactgccaacagaacaaaagatgatgaactggtgcttatt
catcttggagattgtttgtggaaggaaaggagtaatattattgcagcccacatttgctac
ttagttgcagaagcaaactttgaaccatattcagacactgctagactctgtctcattggt
gcagatcactggaaacatccccgtacatacgcctcccctgaggctattcagagaacagag
gtgtatgaatattcaaagatgctgggaaactctcagttcaccttgcttccatttcaacct
tataaacttgtttatgcacacatgttggctgaagttggaagattgtcagactcgttaaag
tactgtcaagctgtcacaaaatcgttaaaaactggacgaatccccgaggtagaaatctgg
agacaattggttatatccttagaggaaaggataaaagctcaccaacagggagggttttct
gcaaacttagtggctcctggtaaaatagttggtaaattgctcaaccttatcgatagcact
gcccatcgtgttgttggcggccttccgccgcctgttccatcaacatatggcggcactgcc
caacacgattatcatcaacaaccgcatatgggtcctaaggttttagccagtcaatcagca
atgacaatgtcatctttagtgccgtctgaatctatggagcccatcaatcaggcagatgga
aacagcagaaatatgattcataaccgcagtgcttcagaacctgcttttgttcgttctccc
atgcaggatgacacgatgaaggaaaactctgctgattcacaaagtaaatcatctgggaag
actttagggcgtcgtggcttcggttttcgggccatgctttatgaaaaaacggttggtagg
attctaccgtctcgccaggacaaacaggcaaagttgggcgacactaataagttctattat
gatgagaaacttaagagatgggtggaagaaggggttgacccgccagcacaggaagccgcc
cttgctccaccgcctacaatcgcaactttccagaatggatcacctgattatagcctaaag
accgctttatcaaccgaatctttgagctctgagtttgccagctcagctcccgccagtaac
ccttcaggaattccactgattccacccaccacaaatcacttttctgctcgtggaagaaca
ggtgttcgagcaaggtatgttgatactttcaacaaaggcggcggaaaccagaccaactta
tttcaatcacctgccgttcctaccatcaaccgacccaacccgaacccaaacttttttgtt
ccaactgcttcccctgcagcacccgaacaaccagctgataatcatcccgataaccaaacc
ccccccttgctttcttctacaaccagccaatcagcaacgagcattcaaaagtttgcatca
atgaatgatatgccaaaagcgggatcatcatcatcatcattatcattatcaacatccaca
tcatcggttaccaatcattccatgtcacgaagaacatcgtcttggagcggaggcgcggat
caagagttttcggttcctggtggcaatacgtttatgccaaacaagacgaattttgcacag
tcgtcgaatgatgatctccaagaagttgaactttaa
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