Bidens hawaiensis: 143609018
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Entry
143609018 CDS
T11418
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
bhw Bidens hawaiensis
Pathway
bhw03420
Nucleotide excision repair
bhw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143609018
09124 Replication and repair
03420 Nucleotide excision repair
143609018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143609018
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143609018
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
143609018
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
143609018
TCR (transcription coupled repair) factors
Cul4-CSA complex
143609018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_IFT122_1st
RE_MjaI
Motif
Other DBs
NCBI-GeneID:
143609018
NCBI-ProteinID:
XP_076940007
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSTYNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTAHGLQPLLDVPIYG
RIATLELFRSHGETQDLLFIATERYKFCVLQWDADAKEVVTRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVSLKDKDFVEGPWSQNNLDNGAELLIPVPPPFGGVLIIGEETIVYC
SASAFKAIPIRPSITRAYGRVDADGSRYLLGDLSGLLHLLVIVHEKEKVTGLKIELLGET
SIASTISYLDNAFVYVGSSYGDSQLIKLNLQPDSKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLCIVRNGIGINEQASVELQGIKGMWSLRSATDDLYDTFLVVS
FINETRILAMNVEDELEESEIEGFCSQVQTLFCHDAVYNQLVQITSSSVRLVSSESRELK
NEWFPRPGFSINVATANASQVLLATRGGNLVYLEIENGKLVEINHAELKYDISCLDINPI
GENSNRSNLAAVGMWTDISVKIFSLPDLTLKTEDHLGGEIIPRSVLLCAFEGIPYLLCAL
GDGHLLNYLLDMETGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICH
QETSRTFAICSLKYNQSGTEDSEMHFVRLLDDQTFDVKSSYALDQFEYGCSILSCSFSDD
NNAYYCVGTAYVMPEENEPSKGRILVFAVEDRKLQLVAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLREDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDIGQIPTVIFGTVNGVIGVIASLPQEQYLFMEKLQANLRKV
IKGVGGLSHEQWRSFYNEKKTADSRNFLDGDLIESFLDLKKNRMEEIAKAMNVSVEEVMK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgtacaattacgtggtaacagctcataagcctaccaatgtcactcattcatgc
gtcggcaatttcactggtcctcaagagctcaatctcattatcgcgaaatgtactcggatc
gagattcatttgcttacggctcacggattgcagcctttgttggacgtgccgatatacgga
agaatcgcaaccctagaacttttccgttcccatggtgaaacgcaagaccttctgtttatt
gcaaccgaaagatacaagttttgtgttctgcaatgggatgctgatgcaaaggaagttgtt
acaagagctatgggtgatgtctcggatcgcataggcagacctaccgataatggccagatt
ggcattattgaccctgactgcagactcattggacttcatttgtatgatgggttgtttaag
gtcattccatttgataacaaaggacaactcaaagaagcatttaacatcaggctagaagaa
cttcaagtgttggacatcaagtttctatatggttgttcaaagcctacaatcgtcgttctt
tatcaggacaacaaagatgctcgccatgtaaaaacatatgaggtatcgctgaaggataaa
gactttgttgaaggtccatggtctcagaacaatcttgataatggggcagagttgctaata
ccagtcccaccaccttttggcggtgtattaatcataggggaagagacaattgtgtattgt
agtgcttctgcttttaaagcaataccaattagaccttctattactagagcctatggaagg
gtggatgcggatggttcaaggtatttacttggtgatcttagtgggcttcttcacttgctt
gtcatagtgcacgagaaagaaaaggttactggactcaaaattgagcttctaggggagaca
tctatagcatcaactatatcatatcttgataatgcgtttgtatatgtcggttcaagctat
ggagattcccagcttattaagttaaatctccagcctgattcaaaaggttcttatgtggag
gtattagaaagatatgtcaacttgggcccaattgttgacttttgtgtggttgatttagag
agacaaggtcaagggcaggttgttacttgctcaggagcatataaagatggttccctttgc
attgttagaaatgggattgggataaatgaacaggcgtcggtggaactacaaggtatcaaa
ggaatgtggtcactaagatcagctacagatgatctgtatgacacatttttggttgttagt
ttcattaatgagactcggatattagcaatgaatgtagaagacgagctggaggaatctgag
attgagggcttttgttctcaagtacaaactttattctgtcatgatgctgtgtataatcaa
cttgtccagattacttcaagctctgtcagactcgtaagttcagaatcaagagaattaaaa
aacgaatggtttcctcgtcctggcttctctattaatgttgccaccgctaatgcttctcaa
gttctgttggctactagaggtggtaatcttgtttaccttgaaattgagaatggaaaatta
gtggaaataaaccatgccgaactgaaatatgatatttcatgccttgacataaacccgatc
ggtgaaaactctaacagaagcaatcttgctgcggttggtatgtggaccgatattagcgtc
aaaatattttcactccctgacttaactctcaagactgaagatcatcttggtggtgaaatt
attccccgttcggttcttctttgtgcgtttgaagggataccgtacttattgtgtgcactt
ggagatggccatctcttaaactatttactagacatggaaacaggcgaattaacagatagg
aaaaaagtgtcactcgggacccaaccgataacacttagaacgttttcatcaaaaaacact
actcatgtttttgcagcctctgatagaccaactgttatttacagcagtaacaaaaagttg
ctttacagtaatgtgaacctaaaagaagtcagccacatgtgccctttcaactctgctgct
tttccagacagtctcgcaattgctaaagaaggcgatttaacaatcgggacaattgatgat
attcagaagcttcacatccgttcaatcccgcttggcgaacacgcgaggcgaatttgtcat
caagaaacatctcgtacgtttgcgatatgtagtttaaagtacaaccagtcaggcacagag
gattccgaaatgcattttgttcggttgttggatgatcaaacatttgatgtcaaatcaagt
tatgcacttgaccagtttgagtacggttgttccatacttagctgttcgttctcggatgat
aataatgcatattactgtgtgggcacagcttacgttatgccagaggaaaatgaaccatca
aaggggcgtattttggtttttgcggttgaagataggaagcttcaactagtggctgagaaa
gaaactaagggtgcggtttactccttgaacgccttcaatggtaaacttcttgctgctata
aatcaaaaaatccagctgtacaagtggatgcttcgtgaagatggtacacgtgaattgcaa
tctgaatgtggacatcatggtcacatacttgctctctatgtacaaacccgtggggatttc
atcgttgttggtgatttgatgaaatcaatttccctcttgatttataagcacgaggaaggt
gctatagaagaacgggcccgcgactacaacgctaactggatgtcagcagtcgagattctc
gacgacgacatctacctcggcgccgaaaacaacttcaaccttttcacagtccgtaaaaac
agcgaaggcgccaccgacgaggaacgtgggcgtctggaggtggttggtgaataccacctc
ggagaattcgtgaaccgtttccgacacggttcactcgtgatgcggttacccgattctgat
atcggtcaaatccccaccgtcattttcgggacggtcaacggtgttatcggtgtcattgct
tcactccctcaagaacagtaccttttcatggagaaacttcaagctaatctgagaaaggtt
ataaaaggcgttggcggtttgagccatgagcaatggaggtcgttttacaacgagaagaag
actgctgactcgaggaacttcttggatggtgatttgatcgagtcgtttcttgatcttaaa
aagaaccgaatggaagagattgcgaaagctatgaatgtttcggttgaggaagttatgaag
agggtagaagaattaacaaggttgcattaa
DBGET
integrated database retrieval system
