Bidens hawaiensis: 143609978
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Entry
143609978 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143609978 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bhw Bidens hawaiensis
Pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143609978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143609978
Spliceosome [BR:
bhw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
143609978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_Aladin
DSE1_N
PRP4
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
PAC11
NBCH_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR41
CFAP251_N
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
eIF2A
ASA1
WD40_like
Motif
Other DBs
NCBI-GeneID:
143609978
NCBI-ProteinID:
XP_076940701
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MKQRAAALAVPTNDKAVRSRLRRLNEPVTLFGEREMERRDRLRMIMAKLDSEGQLERLMK
VFMEEEAAGNAVGMEDGGGEEEGEAVEYPFYTEGSRELLKVRYEIAKESMVKAAVRLGRA
RRKRDDPDEDVDAEINWALESAKSFGLDCSEIGDVRPLAGCSFSCDGKFLATCSLTGVAK
VWSMPGVNIVSSLKGHTERATDVKFSPTNDQIATASADRTARLWDTQGTLLKTYTGHLDR
LARVAFHPSGKYLGTTSFDKTWRLWDTETGDELLLQEGHSRSVYGLAFHPDGSLAASCGL
DALARVWDLRSGRSILALEGHVKPVFGISFSPNGYHLATGGEDNTCRIWDLRKKRSLYTI
PAHANLISDIKFEPQEGYFLVTASYDMTAKIWSSRDFKPVKVLSGHEAKVTAVDVVAGKL
KINSVMGQPDPSCFSPNFTTRTCFNVLSLLCCWFCRWTKYCNCIS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacgcgccgccgcgttggcagttccgaccaacgacaaggcggtgaggtcacgg
ttgagaagattaaacgaaccggtcacattatttggcgaaagagagatggagcggagagac
aggttgcgaatgataatggcgaaactcgattccgaaggacagttggaaaggttaatgaag
gtgtttatggaggaggaagccgcggggaatgcggtggggatggaggatgggggcggggaa
gaggaaggggaggcggtggagtatccgttttatacggaggggtcgagggagttgttgaag
gtaaggtacgagattgcgaaggagtcgatggtgaaagcggcggtgcggttggggcgggcg
aggcggaagagggatgatccggatgaggatgtggatgccgagattaattgggcgttggag
agtgccaagagttttgggttggattgtagtgagattggggatgtgagaccgcttgccggg
tgctcgttttcgtgtgatggcaagtttcttgccacttgttctttaactggagttgctaaa
gtatggagcatgccaggagtaaatattgtgtcctcactaaagggtcatactgaacgagca
accgatgttaagttttctccaacaaatgaccaaattgccactgcttccgctgaccgaacc
gcacggttatgggacacgcaaggaacactgctcaaaacatacacaggtcatttggaccgg
ctggctcgtgttgcctttcatccatctgggaagtatttgggtactactagctttgataag
acctggagattatgggataccgagacaggtgatgagttgcttcttcaagaaggtcatagt
cgaagtgtgtatggtttagcttttcaccctgatggctcgttagctgcatcttgtgggctt
gatgcacttgctcgtgtgtgggacctacgatctgggagaagcattcttgccttggaaggt
catgtgaagccggtttttggtatcagtttctccccaaacggctatcatctagcaaccgga
ggcgaagataatacttgtagaatttgggatttaaggaagaagagatccttgtacacaatt
cctgcacacgcaaatcttatttctgatattaaatttgagcctcaagagggatactttttg
gtaaccgcttcttatgatatgaccgctaagatatggtcgtctagagattttaaacctgtc
aaggtcctttctggtcatgaagctaaggttacagctgttgatgtagttgcaggtaagcta
aagataaactctgttatgggtcaacccgacccgtcctgtttctcaccaaactttaccact
cgaacatgctttaatgtactgagtttgttgtgttgctggttttgcagatggacaaagtat
tgcaactgtatctcatga
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