Bidens hawaiensis: 143610873
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Entry
143610873 CDS
T11418
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
bhw Bidens hawaiensis
Pathway
bhw03015
mRNA surveillance pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143610873
09123 Folding, sorting and degradation
03018 RNA degradation
143610873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143610873
03041 Spliceosome [BR:
bhw03041
]
143610873
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
143610873
mRNA cycle factors
Stress granule specific factors
143610873
Spliceosome [BR:
bhw03041
]
Complex C
Other components
Complex C specific factors
143610873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
RRM_RdRP1_2
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
143610873
NCBI-ProteinID:
XP_076941347
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MPMNTASPLPPPPLSIHRSALYVGDLDPYTTENDLLLLFSMIGPVRSVRVCRDRLSFKSL
GYAYVNFLLPSHAAVAMSSLNHTELRGKPMRIMWCQRDPLTRRTGMANLFVKNLDPLVTD
TKLEEVFGEFGKILSCKIAKDVNGKSKGFGFVQFESEESANNALETLDGTALNDKIIYVA
KFMKKNERKEPKFTNVYVKNLDLDFTEFLLKEKFSEYGNVTSAVIMKNADGKSKGFGFVN
FETPDSAKKAIEALNGAVIGSKEWFVGKAMKKAEREGFLKLSRQNDKIHLSNLFVKNLAT
SVNEKFLEDAFGEFGKVVLTKVVRYNTGISKGFGFVGFSNADEAKKACDSLNGKLYHGKH
MNVSVAMSKEECAQKLQARFVSAKIIGHNPYFSPYYGMQSYGKTSIYDPYWQPNIYRRVQ
VFPNFKQESHQEQVNSGYYKDQKPFKNFKAYFSEGSLAKEAHQNLSGFKSSRVLWGMKRP
KEQGSRRACLKVKNEVGANEGVFGLQENWSY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgaatactgcatctccattaccaccaccgcctctgtcaatccaccgctccgcc
ctgtacgtcggtgaccttgacccgtacaccacggagaacgatctccttctactcttctcc
atgatcggaccggtgcgatctgttcgtgtttgcagagaccgtctctcctttaaatccctc
ggttatgcttacgtcaatttcttacttccttctcacgccgctgtggcaatgtcgagtttg
aatcatactgaattgaggggaaaaccgatgagaatcatgtggtgtcaacgagatccgcta
acgagaagaactggaatggcgaatttgtttgtcaagaatctggatccattagttactgat
acgaaactagaagaggtttttggggaatttgggaagattctttcgtgtaagattgctaaa
gatgttaatggaaagagcaagggttttggcttcgtgcaatttgaatcagaagagtccgct
aataacgcactcgaaactctagatggaactgctctcaatgacaaaatcatatatgtggcc
aagtttatgaagaaaaacgagaggaaggagcccaaatttacaaacgtgtatgtgaagaat
cttgatttggattttactgagtttctgttgaaagagaagttttctgaatatgggaatgtt
acaagtgctgtgatcatgaagaatgctgatgggaaatcaaaaggtttcgggtttgtcaat
tttgagacaccggacagtgccaagaaggccattgaagctctaaacggtgcagtaatcggt
tctaaggagtggtttgttggaaaggctatgaagaaagcagaaagagaagggttcttgaag
ctttctcgtcaaaatgacaaaatacacttgtcaaatctttttgtcaagaatcttgctaca
tctgttaatgaaaagtttcttgaagacgcttttggtgaatttgggaaagtggttttaacc
aaagttgttcgttataacactgggattagcaaggggtttggatttgtgggtttctctaat
gcagatgaagcaaagaaagcttgtgactcccttaatgggaaactttatcatggaaagcac
atgaatgtaagtgttgcaatgagtaaagaagaatgtgcacagaaattacaagctcgtttc
gtatcagcaaagattattggtcacaacccgtatttcagtccgtattatggtatgcagtca
tatggtaaaacatccatctatgatccatactggcagccaaacatttatagaagggtgcaa
gttttcccgaattttaaacaagagagtcatcaggaacaggttaactcaggctattacaag
gatcagaagccatttaagaactttaaagcatatttctcagaaggttcgttagccaaggag
gctcaccagaatctaagtggctttaagagttctagagtgttgtggggaatgaaaaggcca
aaagaacaggggtcaagaagggcatgtttgaaagttaagaatgaagttggagcaaatgaa
ggtgtgtttggattacaagagaattggagctactga
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