Bidens hawaiensis: 143611372
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Entry
143611372 CDS
T11418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 6-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143611372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143611372
03036 Chromosome and associated proteins [BR:
bhw03036
]
143611372
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143611372
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
143611372
mRNA degradation factors
5'-3' decay
Decapping complex
143611372
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
143611372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143611372
NCBI-ProteinID:
XP_076941699
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MNNNNNNNNPNIINNNNNNYARGGNGGRYPPGIGRGGGGGGGYYGNPSPNFQQQKSYQQQ
QQQYSQRNPVQFQQQQQQQQQWLRRSAVGNEISAVDEVEKTVQSEAADASSQDWKAQLRL
PPADTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILA
RAKNGTGKTAAFCIPALEKIDIDKNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVT
TGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGICALKDCAMLVMDEADKLLSPEFQPS
VEQLIHFMPRNRQILMFSATFPVTVKDFKDKYLQKPYVINLMDELTLKGITQFYAFVEER
QKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNQVFHD
FRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT
YEDRFNLYRIEQELGTEIKQIPPFIDQAIYCR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacaacaataataataatcctaatattatcaataataataataataattac
gcacgtggaggtaatggtggaaggtatccaccgggaattggccgcggcggcggtggtggt
ggaggttattatggaaaccctagccctaattttcagcagcagaagagttaccagcagcag
cagcaacagtattcgcaaaggaatccggtgcagtttcagcaacagcagcagcagcagcag
cagtggttgaggaggagtgcggtggggaatgaaattagtgcggtggatgaagtcgagaag
acggtgcagtcggaagcggcggatgctagttctcaagattggaaggcacagttgaggctc
ccacccgctgatacgcgatacaggacagaagatgtgacagccacaaaaggaaatgaattt
gaagactactttctcaagcgggagttacttatggggatatacgagaagggttttgagagg
ccatctccaattcaggaggaaagcattcccattgctcttacaggaagtgatattcttgca
agagctaaaaatggcacagggaagacagctgctttctgcattcccgctttagaaaaaatt
gatatagacaaaaatgtcattcaagttgttatacttgttccaacccgagagttggctctt
cagacatcacaagtgtgcaaagaacttggaaaacatctaaacattcaagttatggtaacc
accggtgggaccagcttaaaagatgacatcatgcgattataccaaccagttcatttactt
gtcggtactcctggaagaatattagatcttactaagaagggaatctgtgcattgaaagat
tgtgcgatgcttgttatggatgaggctgataaacttttgtcaccggaatttcagccgtca
gtagagcaactgattcactttatgcctaggaatcgtcaaattttaatgttttccgcaacg
tttcctgtgacagtcaaggatttcaaagataaatatcttcagaagccgtatgtaattaac
ctcatggacgaacttacacttaagggaataacacagttttatgcttttgttgaagaacga
cagaaagttcactgcctcaacactcttttctcgaagcttcaaatcaaccaatcgatcatt
ttctgcaattctgttaaccgggttgaactattggccaagaaaattacagagcttggctac
tcttgtttctacattcatgcaaaaatgcttcaagatcaccgtaatcaagtttttcatgat
tttcgtaatggtgcttgcaggaatcttgtctgcacggatttgttcactaggggtattgat
attcaagcagtaaacgttgttatcaattttgactttccaaaaaactctgaaacatatctg
cacagggttggtcgatcagggaggtttggacaccttggtctagcagtgaatctgattacg
tatgaagatcgttttaatctgtataggattgaacaagaacttggaaccgagataaagcag
atccctccgttcattgatcaggctatttattgtcggtga
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